We have recently developed a method for automatically segmenting the hippocampal subfields from ultra-high resolution MRI data. The software code is not yet in FreeSurfer, but will be in the future. It produces volumetric segmentations, rather than surface representations, though.

- Koen

Can freesurfer flatten (and only display) a (or several) segmented subcortical area(s), e.g. hippocampal region? If yes, can the fine structures in such a region (such as CA1,2,3, DG, etc.) be labeled?

Thanks,

Mingwu