Dear experts,
I have functional labels registered to Brain A. I also have another anatomical data (Brain B) of the SAME SUBJECT, scanned at a different time.
I'd like to calculate cortical thickness of Brain B at those labels, using the functionally defined label that was created with Brain A.
Is there a way to convert the functional labels from Brain A to Brain B? Or do I need to re-do the whole functional analysis using the Brain B?
Best, Yuko Yotsumoto
Hi Yuko, you can just use mri_label2label to transfer the label from A to B doug
On 6/10/14 8:36 AM, Yuko Yotsumoto wrote:
Dear experts,
I have functional labels registered to Brain A. I also have another anatomical data (Brain B) of the SAME SUBJECT, scanned at a different time.
I'd like to calculate cortical thickness of Brain B at those labels, using the functionally defined label that was created with Brain A.
Is there a way to convert the functional labels from Brain A to Brain B? Or do I need to re-do the whole functional analysis using the Brain B?
Best, Yuko Yotsumoto _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Yuko
sure, you can use mri_robust_register to register them, then give the resulting transform to mri_label2label to map the label from one timepoint to the other. Or you can run them both through the longitudinal stream, in which case the registration etc... will be done for you
cheers Bruce
On Tue, 10 Jun 2014, Yuko Yotsumoto wrote:
Dear experts,
I have functional labels registered to Brain A. I also have another anatomical data (Brain B) of the SAME SUBJECT, scanned at a different time.
I'd like to calculate cortical thickness of Brain B at those labels, using the functionally defined label that was created with Brain A.
Is there a way to convert the functional labels from Brain A to Brain B? Or do I need to re-do the whole functional analysis using the Brain B?
Best, Yuko Yotsumoto _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu