Hi - how much memory do you have on your machine?

On Mon, Dec 14, 2015 at 10:54 AM, salvatoreandrea.92@libero.it < salvatoreandrea.92@libero.it> wrote:

Hi Freesurfer experts!

I tried to run recon-all base for a longitudinal analysis on my data. But I get the following error:

*Excessive topologic defect encountered: could not allocate 221309241 edges for retessellationCannot allocate memoryLinux salvatore-HP-630-Notebook-PC 3.19.0-39-generic #44~14.04.1-Ubuntu SMP Wed Dec 2 10:00:35 UTC 2015 x86_64 x86_64 x86_64 GNU/Linux*

I tried with a more powerful pc but I encountered the same problem.

Following further information:

SUBJECT template_base DATE ven 11 dic 2015, 08.17.47, CET USER salvatore HOST salvatore-HP-630-Notebook-PC PROCESSOR x86_64 OS Linux Linux salvatore-HP-630-Notebook-PC 3.19.0-39-generic #44~14.04.1-Ubuntu SMP Wed Dec 2 10:00:35 UTC 2015 x86_64 x86_64 x86_64 GNU/Linux $Id: recon-all,v 1.379.2.73 2013/05/12 23:15:37 nicks Exp $ /home/salvatore/freesurfer/bin/recon-all PWD /home/salvatore/freesurfer/subjects/template_base/scripts CMD mris_fix_topology -mgz -sphere qsphere.nofix -ga -seed 1234 template_base lh

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