External Email - Use Caution
Dear Freesurfer team,
I am trying to use mri_WMHSynthseg for white matter hyperintensity segmentation. I have installed the latest dev version, and I understand I need to download an atlas file from " https://secure-web.cisco.com/1rKqiV3c2UqdiIsJcAkgN6Rp80ECVnAQhuP-ybfrZvES9uR...". However, I get a 404 error when I try to access this url. Upon examining the server, I see that https://secure-web.cisco.com/1mPu-NE2sUuQ7fyqENpvjVu3_TN_mht4HgGfcxc1kLZmIQg... is empty. Could you help me gain access to this atlas file? Thank you.
Best, Gavin Cui
Hello Gavin,
There was an issue with our FTP server, it should now be resolved. Please retry the download.
Best, Jackson
From: Cui, Qiming Gavin.Cui@ucsf.edu Date: Monday, February 2, 2026 at 2:39 PM To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Issue accessing WMH-Synthseg required files
External Email - Use Caution Dear Freesurfer team,
I am trying to use mri_WMHSynthseg for white matter hyperintensity segmentation. I have installed the latest dev version, and I understand I need to download an atlas file from " https://ftp.nmr.mgh.harvard.edu/pub/dist/lcnpublic/dist/Histo_Atlas_Iglesias...https://secure-web.cisco.com/1rKqiV3c2UqdiIsJcAkgN6Rp80ECVnAQhuP-ybfrZvES9uRBuXZByvRIhn-iB0NmHTmoeoUEuCQNXQzjJS4HSHnsKxvv_jzziUS4cgpOD3cWbfBk2ftDIWc_Vb2BiTNxkLEtpwVLjVkGpkFG5nZCLVQDClQX9fePFWvwXkXo1ThsK8VttWrm_C_lAX0RfThnyWBGzqbTys5dGQ1Mknc-6afLMwyZq2JfcIjIqjjdELC4iotntJzH-lu6H6u-H_y_hsncGBQtdrxw1ewfeFJeSRf5QZ3bm_ubATPVhOwI7OuueiBeRizZ75DBnnPDo7w0KutVcL5hgwgJmPnvsu1o0hxjG8mCHDYU2cL3uE0Zb4lA/https%3A%2F%2Fftp.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Flcnpublic%2Fdist%2FHisto_Atlas_Iglesias_2023%2Fatlas.zip". However, I get a 404 error when I try to access this url. Upon examining the server, I see that https://ftp.nmr.mgh.harvard.edu/pub/dist/lcnpublic/https://secure-web.cisco.com/1mPu-NE2sUuQ7fyqENpvjVu3_TN_mht4HgGfcxc1kLZmIQgueDDA-g_DJ1Fp6C3BKlzSx01W9DEOtmfpYqzLzxbmYDHrTsM7WaPynOJjoc5GKa14fH5NkwLi2egEVEK2SHoSaAok_u-yHuSIhuUOqQt8NcVaOADXFZk7bUkWA71Mxc-rbKom5c2oNcddLnWYpxZ42hoaKMFdzPR-amauT1fZJi_rpFLoUpilWqQK72-wNALVakFbbyZhH7TeOqDvOJY7eLnyYFSEywV7C2o3xl0Ji2V7adGcwqzKfJXLWWzUsoXGsjNqp5qJigrYeVUu7OBotJb9F8eS_T_wiOycZbrJcYY4h73wLUGRG884z8lE/https%3A%2F%2Fftp.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Flcnpublic%2F is empty. Could you help me gain access to this atlas file? Thank you.
Best, Gavin Cui
freesurfer@nmr.mgh.harvard.edu