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Dear freesurfer experts,
I'm interested in doing subfield segmentations of the hippocampus in version 6.0. What I am specifically interested in, is that if I can expect better segmentations if I use a 1mm isotropic FLAIR series in addition to the 1mm isotropic T1 series, rather than using the T1 series alone.
Regards Ole Johan Sørhaug
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Without having seen your FLAIR scans, I’d say probably not, but it’s an empirical question; give them a go! ;-)
-- Juan Eugenio Iglesias ERC Senior Research Fellow Centre for Medical Image Computing (CMIC) University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Ole Johan Evjenth Sørhaug ojesorhaug@gmail.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Monday, 20 August 2018 at 13:17 To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Freesurfer v6.0: Using FLAIR for hippocampal subfields
External Email - Use Caution Dear freesurfer experts,
I'm interested in doing subfield segmentations of the hippocampus in version 6.0. What I am specifically interested in, is that if I can expect better segmentations if I use a 1mm isotropic FLAIR series in addition to the 1mm isotropic T1 series, rather than using the T1 series alone.
Regards Ole Johan Sørhaug
freesurfer@nmr.mgh.harvard.edu