When running tksurfer in 7.1.1 (from https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.1.1/freesurfer-linu... ) , I get:
Tcl_Init failed: Can't find a usable init.tcl in the following directories: /usr/pubsw/packages/tcltktixblt/current/lib/tcl8.4
This probably means that Tcl wasn't installed properly.
Tk_Init failed: invalid command name "tcl_findLibrary" Tix_Init failed: Can't find a usable Tix Init.tcl in the following directories: ./library ./tix8.1 ./library ./tix8.1 /usr/pubsw/packages/tcltktixblt/current/lib/tix8.1
This probably means that Tix wasn't installed properly.
What should I do about this?
It works under 6.0.1.
-- Daniel M. Drucker, Ph.D. Director of IT McLean Hospital Imaging Center Harvard Medical School
Hi Daniel
Tksurfer has been deprecated for a long time. Have you tried freeview instead?
Cheers Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu On Behalf Of Drucker, Daniel Sent: Thursday, July 15, 2021 10:21 AM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] /usr/pubsw reference in 7.1.1
When running tksurfer in 7.1.1 (from https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.1.1/freesurfer-linu... ) , I get:
Tcl_Init failed: Can't find a usable init.tcl in the following directories: /usr/pubsw/packages/tcltktixblt/current/lib/tcl8.4
This probably means that Tcl wasn't installed properly.
Tk_Init failed: invalid command name "tcl_findLibrary" Tix_Init failed: Can't find a usable Tix Init.tcl in the following directories: ./library ./tix8.1 ./library ./tix8.1 /usr/pubsw/packages/tcltktixblt/current/lib/tix8.1
This probably means that Tix wasn't installed properly.
What should I do about this?
It works under 6.0.1.
-- Daniel M. Drucker, Ph.D. Director of IT McLean Hospital Imaging Center Harvard Medical School
you can use tksurferfv -- this runs freeview but with tksurfer arguments
On 7/15/2021 10:50 AM, Fischl, Bruce wrote:
Hi Daniel
Tksurfer has been deprecated for a long time. Have you tried freeview instead?
Cheers
Bruce
*From:* freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu *On Behalf Of *Drucker, Daniel *Sent:* Thursday, July 15, 2021 10:21 AM *To:* freesurfer@nmr.mgh.harvard.edu *Subject:* [Freesurfer] /usr/pubsw reference in 7.1.1
When running tksurfer in 7.1.1 (from https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.1.1/freesurfer-linu... https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.1.1/freesurfer-linux-centos7_x86_64-7.1.1.tar.gz ) , I get:
Tcl_Init failed: Can't find a usable init.tcl in the following directories:
/usr/pubsw/packages/tcltktixblt/current/lib/tcl8.4
This probably means that Tcl wasn't installed properly.
Tk_Init failed: invalid command name "tcl_findLibrary"
Tix_Init failed: Can't find a usable Tix Init.tcl in the following directories:
./library
./tix8.1
./library
./tix8.1
/usr/pubsw/packages/tcltktixblt/current/lib/tix8.1
This probably means that Tix wasn't installed properly.
What should I do about this?
It works under 6.0.1.
-- Daniel M. Drucker, Ph.D. Director of IT McLean Hospital Imaging Center Harvard Medical School
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
I should add - the tksurfer call is from within https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FLICA . Is there an updated version that doesn’t have this issue?
On Jul 15, 2021, at 10:20 AM, Drucker, Daniel <DDRUCKER@MCLEAN.HARVARD.EDUmailto:DDRUCKER@MCLEAN.HARVARD.EDU> wrote:
When running tksurfer in 7.1.1 (from https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.1.1/freesurfer-linu... ) , I get:
Tcl_Init failed: Can't find a usable init.tcl in the following directories: /usr/pubsw/packages/tcltktixblt/current/lib/tcl8.4
This probably means that Tcl wasn't installed properly.
Tk_Init failed: invalid command name "tcl_findLibrary" Tix_Init failed: Can't find a usable Tix Init.tcl in the following directories: ./library ./tix8.1 ./library ./tix8.1 /usr/pubsw/packages/tcltktixblt/current/lib/tix8.1
This probably means that Tix wasn't installed properly.
What should I do about this?
It works under 6.0.1.
-- Daniel M. Drucker, Ph.D. Director of IT McLean Hospital Imaging Center Harvard Medical School
External Email - Use Caution
I'm not familiar with FLICA, but you should be able to make a symlink for compatibility issues like this.
First, backup the original tksurfer: mv $FREESURFER_HOME/bin/tksurfer $FREESURFER_HOME/bin/tksurfer.orig
Then: ln -s $FREESURFER_HOME/bin/tksurferfv $FREESURFER_HOME/bin/tksurfer
-Paul
On Thu, Jul 15, 2021 at 12:08 PM Drucker, Daniel < DDRUCKER@mclean.harvard.edu> wrote:
I should add - the tksurfer call is from within https://secure-web.cisco.com/1WuVfYYRukc0QvViLSuVYxLPwiQnIU-kGsRNMRC4v4tKzj2... . Is there an updated version that doesn’t have this issue?
On Jul 15, 2021, at 10:20 AM, Drucker, Daniel DDRUCKER@MCLEAN.HARVARD.EDU wrote:
When running tksurfer in 7.1.1 (from https://secure-web.cisco.com/1i2_vYt4MpPoLq7xti7e6RDoDeR-coHY-G-rqUbKV50mi7x... ) , I get:
Tcl_Init failed: Can't find a usable init.tcl in the following directories: /usr/pubsw/packages/tcltktixblt/current/lib/tcl8.4
This probably means that Tcl wasn't installed properly.
Tk_Init failed: invalid command name "tcl_findLibrary" Tix_Init failed: Can't find a usable Tix Init.tcl in the following directories: ./library ./tix8.1 ./library ./tix8.1 /usr/pubsw/packages/tcltktixblt/current/lib/tix8.1
This probably means that Tix wasn't installed properly.
What should I do about this?
It works under 6.0.1.
-- Daniel M. Drucker, Ph.D. Director of IT McLean Hospital Imaging Center Harvard Medical School
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1m7BCCCWawD_P-1_zIJhFgOyvcOgn0m6IhDeEaelG0cXmDI... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at http://secure-web.cisco.com/1GqNYZzXKkVA2eZsH6EmZqPP55kmYSg2QR-k9baXFqXJDae0... . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
freesurfer@nmr.mgh.harvard.edu