Hello Experts,
I apologise for the stupidity of this question, but I am not used to using Linux at all, but I need to uninstall my Freesurfer and then reinstall it, however, I have no idea how to uninstall in Linux. Can someone possibly assist me in this problem? I'd be extremely grateful.
Thank you and Kind regards, Fatima
You can simply execute: rm -rf /usr/local/freesurfer
If your freesurfer installation is in another directory, change the command above accordingly ----------------------------------------------------------- Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.br --- Em breve Netfilter Small Business
2009/8/11 Ahmed, F, Me fahmed@sun.ac.za fahmed@sun.ac.za
Hello Experts,
I apologise for the stupidity of this question, but I am not used to using Linux at all, but I need to uninstall my Freesurfer and then reinstall it, however, I have no idea how to uninstall in Linux. Can someone possibly assist me in this problem? I’d be extremely grateful.
Thank you and Kind regards, Fatima
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
I executed this command, but nothing happened. Is that supposed to happen? How do I know if this has uninstalled Freesurfer?
Thank you and regards, Fatima
From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Pedro Paulo de Magalhães Oliveira Junior Sent: 11 August 2009 15:21 To: Ahmed, F, Me Cc: Freesurfer Mailing List Subject: Re: [Freesurfer] reinstalling freesurfer
You can simply execute:
rm -rf /usr/local/freesurfer
If your freesurfer installation is in another directory, change the command above accordingly ----------------------------------------------------------- Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.brhttp://www.Netfilter.com.br --- Em breve Netfilter Small Business
2009/8/11 Ahmed, F, Me <fahmed@sun.ac.zamailto:fahmed@sun.ac.za> <fahmed@sun.ac.zamailto:fahmed@sun.ac.za> Hello Experts,
I apologise for the stupidity of this question, but I am not used to using Linux at all, but I need to uninstall my Freesurfer and then reinstall it, however, I have no idea how to uninstall in Linux. Can someone possibly assist me in this problem? I'd be extremely grateful.
Thank you and Kind regards, Fatima
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Fatima,
try
rm -rf $FREESURFER_HOME
The command which Pedro gave you assumed that your freesurfer installation directory was /usr/local/, which may not be the case. If you had freesurfer correctly installed before, you must have had the $FREESURFER_HOME variable set correctly. Thus the command above should remove, if you have sufficent permissions.
To check whether the command was effective you could try
ls $FREESURFER_HOME
If there are no file listed, you have successfully removed it.
Hope this helps.
Martin
2009/8/13 Ahmed, F, Me fahmed@sun.ac.za fahmed@sun.ac.za
I executed this command, but nothing happened. Is that supposed to happen? How do I know if this has uninstalled Freesurfer?
Thank you and regards,
Fatima
*From:* freesurfer-bounces@nmr.mgh.harvard.edu [mailto: freesurfer-bounces@nmr.mgh.harvard.edu] *On Behalf Of *Pedro Paulo de Magalhães Oliveira Junior *Sent:* 11 August 2009 15:21 *To:* Ahmed, F, Me *Cc:* Freesurfer Mailing List *Subject:* Re: [Freesurfer] reinstalling freesurfer
You can simply execute:
rm -rf /usr/local/freesurfer
If your freesurfer installation is in another directory, change the command above accordingly
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.br --- Em breve Netfilter Small Business
2009/8/11 Ahmed, F, Me fahmed@sun.ac.za fahmed@sun.ac.za
Hello Experts,
I apologise for the stupidity of this question, but I am not used to using Linux at all, but I need to uninstall my Freesurfer and then reinstall it, however, I have no idea how to uninstall in Linux. Can someone possibly assist me in this problem? I’d be extremely grateful.
Thank you and Kind regards,
Fatima
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thank you Martin, you were correct, my Freesurfer was not installed in that directory, but I managed to uninstall it...now I have to reinstall. But I'm wondering how I'm going to avoid the same problems I faced when installing it before. Are there any tips you (or anyone) can give to help me with this? I'd be extremely grateful.
Thank you and kind regards, Fatima
From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Martin Kavec Sent: 13 August 2009 11:53 To: Ahmed, F, Me Cc: Freesurfer Mailing List; Pedro Paulo de Magalhães Oliveira Junior Subject: Re: [Freesurfer] reinstalling freesurfer
Fatima,
try
rm -rf $FREESURFER_HOME
The command which Pedro gave you assumed that your freesurfer installation directory was /usr/local/, which may not be the case. If you had freesurfer correctly installed before, you must have had the $FREESURFER_HOME variable set correctly. Thus the command above should remove, if you have sufficent permissions.
To check whether the command was effective you could try
ls $FREESURFER_HOME
If there are no file listed, you have successfully removed it.
Hope this helps.
Martin 2009/8/13 Ahmed, F, Me <fahmed@sun.ac.zamailto:fahmed@sun.ac.za> <fahmed@sun.ac.zamailto:fahmed@sun.ac.za>
I executed this command, but nothing happened. Is that supposed to happen? How do I know if this has uninstalled Freesurfer?
Thank you and regards,
Fatima
From: freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Pedro Paulo de Magalhães Oliveira Junior Sent: 11 August 2009 15:21 To: Ahmed, F, Me Cc: Freesurfer Mailing List Subject: Re: [Freesurfer] reinstalling freesurfer
You can simply execute:
rm -rf /usr/local/freesurfer
If your freesurfer installation is in another directory, change the command above accordingly ----------------------------------------------------------- Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.brhttp://www.Netfilter.com.br --- Em breve Netfilter Small Business
2009/8/11 Ahmed, F, Me <fahmed@sun.ac.zamailto:fahmed@sun.ac.za> <fahmed@sun.ac.zamailto:fahmed@sun.ac.za>
Hello Experts,
I apologise for the stupidity of this question, but I am not used to using Linux at all, but I need to uninstall my Freesurfer and then reinstall it, however, I have no idea how to uninstall in Linux. Can someone possibly assist me in this problem? I'd be extremely grateful.
Thank you and Kind regards,
Fatima
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Fatima,
not sure what problems you refer to? At the beginning of the thread you mentioned you need to uninstall and reinstall FS. Where there some other issues you had?
Best,
Martin
On Thu, Aug 13, 2009 at 12:27 PM, Ahmed, F, Me fahmed@sun.ac.za < fahmed@sun.ac.za> wrote:
Thank you Martin, you were correct, my Freesurfer was not installed in that directory, but I managed to uninstall it...now I have to reinstall. But I’m wondering how I’m going to avoid the same problems I faced when installing it before. Are there any tips you (or anyone) can give to help me with this? I’d be extremely grateful.
Thank you and kind regards,
Fatima
*From:* freesurfer-bounces@nmr.mgh.harvard.edu [mailto: freesurfer-bounces@nmr.mgh.harvard.edu] *On Behalf Of *Martin Kavec *Sent:* 13 August 2009 11:53 *To:* Ahmed, F, Me *Cc:* Freesurfer Mailing List; Pedro Paulo de Magalhães Oliveira Junior
*Subject:* Re: [Freesurfer] reinstalling freesurfer
Fatima,
try
rm -rf $FREESURFER_HOME
The command which Pedro gave you assumed that your freesurfer installation directory was /usr/local/, which may not be the case. If you had freesurfer correctly installed before, you must have had the $FREESURFER_HOME variable set correctly. Thus the command above should remove, if you have sufficent permissions.
To check whether the command was effective you could try
ls $FREESURFER_HOME
If there are no file listed, you have successfully removed it.
Hope this helps.
Martin
2009/8/13 Ahmed, F, Me fahmed@sun.ac.za fahmed@sun.ac.za
I executed this command, but nothing happened. Is that supposed to happen? How do I know if this has uninstalled Freesurfer?
Thank you and regards,
Fatima
*From:* freesurfer-bounces@nmr.mgh.harvard.edu [mailto: freesurfer-bounces@nmr.mgh.harvard.edu] *On Behalf Of *Pedro Paulo de Magalhães Oliveira Junior *Sent:* 11 August 2009 15:21 *To:* Ahmed, F, Me *Cc:* Freesurfer Mailing List *Subject:* Re: [Freesurfer] reinstalling freesurfer
You can simply execute:
rm -rf /usr/local/freesurfer
If your freesurfer installation is in another directory, change the command above accordingly
Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.br --- Em breve Netfilter Small Business
2009/8/11 Ahmed, F, Me fahmed@sun.ac.za fahmed@sun.ac.za
Hello Experts,
I apologise for the stupidity of this question, but I am not used to using Linux at all, but I need to uninstall my Freesurfer and then reinstall it, however, I have no idea how to uninstall in Linux. Can someone possibly assist me in this problem? I’d be extremely grateful.
Thank you and Kind regards,
Fatima
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Ok, I realised my mistake, I wasn't entering the correct directory. I believe it now worked and it is uninstalled. Thank you very much. Next step is to reinstall...
From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Pedro Paulo de Magalhães Oliveira Junior Sent: 11 August 2009 15:21 To: Ahmed, F, Me Cc: Freesurfer Mailing List Subject: Re: [Freesurfer] reinstalling freesurfer
You can simply execute:
rm -rf /usr/local/freesurfer
If your freesurfer installation is in another directory, change the command above accordingly ----------------------------------------------------------- Pedro Paulo de M. Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom --- Novo Netfilter 3.0 www.Netfilter.com.brhttp://www.Netfilter.com.br --- Em breve Netfilter Small Business
2009/8/11 Ahmed, F, Me <fahmed@sun.ac.zamailto:fahmed@sun.ac.za> <fahmed@sun.ac.zamailto:fahmed@sun.ac.za> Hello Experts,
I apologise for the stupidity of this question, but I am not used to using Linux at all, but I need to uninstall my Freesurfer and then reinstall it, however, I have no idea how to uninstall in Linux. Can someone possibly assist me in this problem? I'd be extremely grateful.
Thank you and Kind regards, Fatima
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
-
Ahmed, F, Me <fahmed＠sun.ac.za> -
Martin Kavec -
Pedro Paulo de Magalhães Oliveira Junior