External Email - Use Caution
Hi FreeSurfer Team, I hope this email finds you well.
I'm trying to use a T1 image to get the aparc+aseg and wmparc nifti files.
I was using this command: recon-all -s Subject1 -i T1.nii - all -notal -check ( I used recon-all -s Subject1 -i T1.nii - all first, and after getting Talairach error, I added -nota -check at the end).
I'm getting the following messages without a clear error number: recon-all -s Subject1 exited with ERRORS at Thu Dec 14 21:18:02 EST 2023 For more details, see the log file /home/developer/Desktop/freesurfer/7.2.0/subjects/Subject1/scripts/recon-all.log To report a problem, see http://secure-web.cisco.com/1BSxCZVaZV339Q-WAflS64QucA-5MEBgQ3fZ93nAe5XWzCQQ...
The version of the freesurfer: freesurfer-linux-ubuntu18_x86_64-7.2.0-20210721-aa8f76b
My platform is ubuntu 18_04_06 on Oracle VM VirtualBox
I've attached the log file.
External Email - Use Caution
Hi Fargol,I recently heard about some problems from my coworkers who were using Ubuntu 18 and version 7.2.0 of the software. However, I am currently using version 7.2.0 on Ubuntu 22.04.2 LTS, and it works well for me. You could try it out and see if it works for you as well.bests,Yunus
--------------------------------------------------------------------------------Yunus Soleymani Ph.D. Candidate of Neuroimaging Tehran University of Medical Sciences soleymani.yunus@yahoo.com+98 914 526 9298--------------------------------------------------------------------------------
On Friday, January 5, 2024 at 10:05:54 PM GMT+3:30, Fargol Rezayaraghi fargor@uw.edu wrote:
External Email - Use Caution
Hi FreeSurfer Team,I hope this email finds you well. I'm trying to use a T1 image to get the aparc+aseg and wmparc nifti files. I was using this command: recon-all -s Subject1 -i T1.nii - all -notal -check ( I used recon-all -s Subject1 -i T1.nii - all first, and after getting Talairach error, I added -nota -check at the end). I'm getting the following messages without a clear error number: recon-all -s Subject1 exited with ERRORS at Thu Dec 14 21:18:02 EST 2023For more details, see the log file /home/developer/Desktop/freesurfer/7.2.0/subjects/Subject1/scripts/recon-all.log To report a problem, see MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be http://secure-web.cisco.com/10GJJxvX0-sL9yXdw4m4icBtc_KuoxI2ifvKqyRnnEgg6I_m...
The version of the freesurfer: freesurfer-linux-ubuntu18_x86_64-7.2.0-20210721-aa8f76b My platform is ubuntu 18_04_06 on Oracle VM VirtualBox I've attached the log file.
freesurfer@nmr.mgh.harvard.edu