External Email - Use Caution

mri_label2vol --srcubject fsaverage --srclabel fsaverage/label/lh.x.label --trgsubject >subject> --trglabel <subject>/label/lh.x.label --regmethod surface --hemi lh for surface registration

mri_label2vol --srcubject fsaverage --srclabel fsaverage/label/lh.x.label --trgsubject >subject> --trglabel <subject>/label/lh.x_vol.label --regmethod volume for volume registration

Thank you for the help! Best Idil ________________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu [freesurfer-bounces@nmr.mgh.harvard.edu] on behalf of Douglas N. Greve [dgreve@mgh.harvard.edu] Sent: Wednesday, August 15, 2018 6:28 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mri_label2label no registration difference

Can you send the command lines you used?

On 08/15/2018 05:54 AM, Yagmur Ozdemir 19 wrote:

    External Email - Use Caution

Hello FreeSurfer experts,

I want to compare the labels produced by two different registration methods in mri_label2label; either using the sphere or TAL space as an intermediate ( --regmethod). However I see that there is no difference between the labels produced with these different registrations. Is this normal or should I look for an error? I looked at the script to match with my outputs and everything seems to have worked allright.

Thank you Idil

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.