Hello list,
When running the following command :
mri_label2label --srcsubject fsaverage --srclabel /home/user/visao/Freesurfer/fsaverage/label/lh.BA1.thresh.label --trgsubject subjid --trglabel ./lh.BA1.thresh.label --hemi lh --regmethod surface
I get the error
"INFO: found 1014 nlabel points Performing mapping from target back to the source label ERROR: SRCVTXNO = -1 < 0 trgvtxno = 122050, dmin = 1000 trgregxyz = 0, 0, 0 This means that a vertex in the target surface could not be mapped to a vertex in the source surface because the xyz of the target is outside of the range of the hash table."
I have used this command in several subjects and never got this error. What went wrong? As far as I'm aware I did all the processing in the same way for every subject.
How can I fix this this?
Thank you! Andreia
Not sure. Try running it with --nohash. It will probably take a lot longer doug
On 03/12/2014 02:45 PM, _andreia_@sapo.pt wrote:
Hello list,
When running the following command :
mri_label2label --srcsubject fsaverage --srclabel /home/user/visao/Freesurfer/fsaverage/label/lh.BA1.thresh.label --trgsubject subjid --trglabel ./lh.BA1.thresh.label --hemi lh --regmethod surface
I get the error
"INFO: found 1014 nlabel points Performing mapping from target back to the source label *ERROR: srcvtxno = -1 < 0* trgvtxno = 122050, dmin = 1000 trgregxyz = 0, 0, 0 This means that a vertex in the target surface could not be mapped to a vertex in the source surface because the xyz of the target is outside of the range of the hash table."
I have used this command in several subjects and never got this error. What went wrong? As far as I'm aware I did all the processing in the same way for every subject.
How can I fix this this?
Thank you! Andreia
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Doug,
Thank you very much! It's working!
Andreia
Quoting Douglas N Greve greve@nmr.mgh.harvard.edu:
Not sure. Try running it with --nohash. It will probably take a lot longer doug
On 03/12/2014 02:45 PM, _andreia_@sapo.pt wrote:
Hello list,
When running the following command :
mri_label2label --srcsubject fsaverage --srclabel /home/user/visao/Freesurfer/fsaverage/label/lh.BA1.thresh.label --trgsubject subjid --trglabel ./lh.BA1.thresh.label --hemi lh --regmethod surface
I get the error
"INFO: found 1014 nlabel points Performing mapping from target back to the source label *ERROR: srcvtxno = -1 < 0* trgvtxno = 122050, dmin = 1000 trgregxyz = 0, 0, 0 This means that a vertex in the target surface could not be mapped to a vertex in the source surface because the xyz of the target is outside of the range of the hash table."
I have used this command in several subjects and never got this error. What went wrong? As far as I'm aware I did all the processing in the same way for every subject.
How can I fix this this?
Thank you! Andreia
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
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Douglas N Greve