Hi All,
I just squashed a most embarrassing error in my sequence naming. The open encoding of the used TR in the protokollname (i.e. mak_epi_TR4) classed with the cheking code in mkanalysis-sess.new. There the grep for "TR" returned not only the TR line out of the seq.info file, but also the erroneously named sequence/protocol name, so 4 instead of 2. My quick and dirty fix was to make the grep find "TR " instead of "TR", as the sequence/protocol name is forbidden to contain whitespaces anyway. I am the first to admit the ugliness of this approach, but it solves the problem without having to rename the sequence. And unpacksdcmdir writes several spaces between the TR and the actual value into the seq.info file in the first place. Maybe relaying on those white spaces in the seq.info file could be used to relax the allowed components of the protocol name for all variables?
Ahoi Sebastian
freesurfer@nmr.mgh.harvard.edu