External Email - Use Caution

Hello Juan,

I am using data from the HCP aging dataset which has a T1 and a high-resolution hippocampal scan (T2).

Yes, it does seem that the T2 and T1's are roughly aligned to each other. It seems like it has something to do with the creation of the tmp/hippoSF_T1T2_v21_highres_left/ folder where the program is expecting something to be produced that is not there/hasn't been produced.

Again, here is an example of the code output/error.

@ linenum = 1 cd /data/bswift-1/dcallow/aging/freesurfer set subj= ( HCA8587705_V1_MR ) rm: No match. rm -rf /a/ha-nfs-2-ib/export/data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/scripts/IsRunning.lh+rh cd /data/bswift-1/dcallow/aging/freesurfer echo HCA8587705_V1_MR HCA8587705_V1_MR segmentHA_T2.sh HCA8587705_V1_MR /data/bswift-1/dcallow/aging/imaging/HCA8587705_V1_MR/unprocessed/TSE_HiResHp/HCA8587705_V1_MR_TSE_HiResHp.nii.gz highres 1 #-------------------------------------------- #@# Hippocampal Subfields processing (T1+T2) left Fri May 28 12:05:35 EDT 2021 ------------------------------------------ Setting up environment variables --- INFO: error loading libraries in default configuration, trying with MCR libraries only LD_LIBRARY_PATH is .:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//runtime/glnxa64:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//bin/glnxa64:/data/bswif$Registering norm.mgz to additional volume No more processes. ERROR: could not open /data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/tmp/hippoSF_T1T2_v21_highres_left/41244773_norm__502687.mgh for reading ERROR: loading /data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/tmp/hippoSF_T1T2_v21_highres_left/41244773_norm__502687.mgh as MGH Warning: File '/data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/tmp/hippoSF_T1T2_v21_highres_left/41244773_norm__502687.mgh' not found. [^H> In myMRIread at 64 In segmentSubjectT1T2_autoEstimateAlveusML at 186]^H Attempt to reference field of non-structure array.

Error in segmentSubjectT1T2_autoEstimateAlveusML (line 188) MATLAB:nonStrucReference @#@FSTIME 2021:05:28:12:05:35 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 e 7.49 S 0.61 U 6.79 P 98% M 283156 F 0 R 84320 W 0 c 2392 w 9596 I 0 O 85080 L 5$@#@FSLOADPOST 2021:05:28:12:05:42 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 60.45 53.15 38.08 Linux compute-4-33.bswift.umd.edu 2.6.32-754.30.2.el6.x86_64 #1 SMP Fri May 29 04:45:43 EDT 2020 x86_64 x86_64 x86_64 GNU/Linux

T2 hippocampal subfields exited with ERRORS at Fri May 28 12:05:42 EDT 2021

For more details, see the log file /data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/scripts/hippocampal-subfields-T2.highres.log

Any ideas what might be causing this error. Again, it seems to be working for a small subset of participants however, the majority are failing with this error. *Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park dcallow@umd.edu dcallow@gmail.com 443-254-6298

On Fri, May 28, 2021 at 9:32 AM Iglesias Gonzalez, Juan E. < JIGLESIASGONZALEZ@mgh.harvard.edu> wrote:

Dear Daniel,

Are the T2s and T1s roughly aligned in RAS (physical coordinates)? In other words: do they (roughly) overlap when you open them together in Freeview?

Cheers,

/E

Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://secure-web.cisco.com/1M43tYnBIwe0As03lwnAGcBzSZfvIXhP_UsjatHKyZUaaQ4w...

On May 28, 2021, at 07:53, Daniel Davidson Callow dcallow@umd.edu wrote:

    External Email - Use Caution

Hello,

I am running into errors when running

segmentHA_T2.sh ${subj} /data/bswift-1/dcallow/aging/freesurfer/${subj}/mri/T2.norm.mgz T2 1

Approximately 10% of my subjects are being processed but for some reason, the majority fail to execute. Here is an output from the error log.

---

USER dcallow HOST compute-4-32.bswift.umd.edu http://secure-web.cisco.com/1ypL43FxiKSZvppDyGttq1kG6jN0GRt9e8cgB2S5Z-8zCzVaVM-bCkayzZxY9xDU_KpcZcFWAPDqh90GDmfaCegId3XT6PKwKdcFIZXP27qvAGlubWjMrtSWPUClEYijiXXbemw4pG8RKDOZj6DPjOltVe5yMFHmf90ukT3OUKeqf7sTx70vaHCRaffDJe-yRzF5oO2Dnqy3JYjPkwjI1FW999MJQXWT6pjT1rnDxOkwbjKhl9FNrKXzV8OI9YJB12uI0m5B759UFLn4F9vrPog/http%3A%2F%2Fcompute-4-32.bswift.umd.edu PROCESSID 4033 PROCESSOR x86_64 OS Linux Linux compute-4-32.bswift.umd.edu http://secure-web.cisco.com/1ypL43FxiKSZvppDyGttq1kG6jN0GRt9e8cgB2S5Z-8zCzVaVM-bCkayzZxY9xDU_KpcZcFWAPDqh90GDmfaCegId3XT6PKwKdcFIZXP27qvAGlubWjMrtSWPUClEYijiXXbemw4pG8RKDOZj6DPjOltVe5yMFHmf90ukT3OUKeqf7sTx70vaHCRaffDJe-yRzF5oO2Dnqy3JYjPkwjI1FW999MJQXWT6pjT1rnDxOkwbjKhl9FNrKXzV8OI9YJB12uI0m5B759UFLn4F9vrPog/http%3A%2F%2Fcompute-4-32.bswift.umd.edu 2.6.32-754.35.1.el6.x86_64

#1 SMP Wed Sep 16 06:48:01 EDT 2020 x86_64 x86_64 x86_64 GNU/Linux

#-------------------------------------------- #@# Hippocampal Subfields processing (T1+T2) left Thu May 27 21:39:51 EDT 2021

---

Setting up environment variables

INFO: error loading libraries in default configuration, trying with MCR libraries only LD_LIBRARY_PATH is .:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//runtime/glnxa64:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//bin/glnxa64:/data/bswift-0$Registering norm.mgz to additional volume makeIsotropic WARNING: not different enough, won't reslice! No more processes. ERROR: could not open /data/bswift-1/dcallow/aging/freesurfer/HCA8537992_V1_MR/tmp/hippoSF_T1T2_v21_T2_left/23207174_T2resampledLikeT1__353506.mgh for reading ERROR: loading /data/bswift-1/dcallow/aging/freesurfer/HCA8537992_V1_MR/tmp/hippoSF_T1T2_v21_T2_left/23207174_T2resampledLikeT1__353506.mgh as MGH Warning: File '/data/bswift-1/dcallow/aging/freesurfer/HCA8537992_V1_MR/tmp/hippoSF_T1T2_v21_T2_left/23207174_T2resampledLikeT1__353506.mgh' not found. [^H> In myMRIread at 64 In segmentSubjectT1T2_autoEstimateAlveusML at 207]^H Attempt to reference field of non-structure array.

Error in segmentSubjectT1T2_autoEstimateAlveusML (line 211)

MATLAB:nonStrucReference @#@FSTIME 2021:05:27:21:39:51 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 e 334.41 S 1.15 U 8.61 P 2% M 818424 F 0 R 185834 W 0 c 2541 w 20306 I 0 O 216480 L $@#@FSLOADPOST 2021:05:27:21:45:25 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 31.22 29.74 28.95 Linux compute-4-32.bswift.umd.edu http://secure-web.cisco.com/1ypL43FxiKSZvppDyGttq1kG6jN0GRt9e8cgB2S5Z-8zCzVaVM-bCkayzZxY9xDU_KpcZcFWAPDqh90GDmfaCegId3XT6PKwKdcFIZXP27qvAGlubWjMrtSWPUClEYijiXXbemw4pG8RKDOZj6DPjOltVe5yMFHmf90ukT3OUKeqf7sTx70vaHCRaffDJe-yRzF5oO2Dnqy3JYjPkwjI1FW999MJQXWT6pjT1rnDxOkwbjKhl9FNrKXzV8OI9YJB12uI0m5B759UFLn4F9vrPog/http%3A%2F%2Fcompute-4-32.bswift.umd.edu 2.6.32-754.35.1.el6.x86_64 #1 SMP Wed Sep 16 06:48:01 EDT 2020 x86_64 x86_64 x86_64 GNU/Linux

T2 hippocampal subfields exited with ERRORS at Thu May 27 21:45:25 EDT 2021

I am also getting a matlab_crash_dump file

---

   Segmentation violation detected at Thu May 27 21:51:52 2021

---

Configuration: Crash Decoding : Disabled Current Visual : None Default Encoding : US-ASCII GNU C Library : 2.12 stable MATLAB Architecture: glnxa64 MATLAB Root : /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux http://secure-web.cisco.com/1zf_ot3cQGUvMhTgphfJ7towMivhNxWKqA3AayyU_OPHHiMasb-EvBGTFN3sYYJDfq2OTyGKzBZ_szFAJCXZHlZGEtJjl-Jdhb4Q1bIAonDtiewkPoyMXUpsAcQaKfsBE0RsmUc-YGdemu96LMj476x2UIb3GfDNjDVx7ULnA6ydsfS5RHTfxedRiKFt6oLIZ-8AmzrNc44dziwIEz2Tm1zVXkZba_ISfg8fwql2KxoL8WGjCE7_3XIDrEbE-HNmMPhnNu3asRalw0_AJ6BOTkA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux MATLAB Version : 8.4.0.150421 (R2014b) Operating System : Linux 2.6.32-754.30.2.el6.x86_64 #1 SMP Fri May 29 04:45:43 EDT 2020 x86_64 Processor ID : x86 Family 6 Model 62 Stepping 4, GenuineIntel Software OpenGL : 0 Virtual Machine : Java 1.7.0_11-b21 with Oracle Corporation Java HotSpot(TM) 64-Bit Server VM mixed mode Window System : No active display

Fault Count: 1

Abnormal termination: Segmentation violation

Stack Trace (from fault): [ 0] 0x00007f2b30f06213 /lib64/libpthread.so.0+00033299 pthread_join+00000035 [ 1] 0x00007f2a9f4d847d /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 2] 0x00007f2a9f4d8cac /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 3] 0x00007f2a9f5cae63 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 4] 0x00007f2a9f5af896 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 5] 0x00007f2a9f5a6b8d /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 6] 0x00007f2a9f5a6fd0 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 7] 0x00007f2a9f5aad00 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 8] 0x00007f2a9f5a5c3c /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 9] 0x00007f2a9f44fb03 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 10] 0x00007f2a9f42b9cc /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 11] 0x00007f2a9f42b132 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 12] 0x00007f2b21dcfc0a /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmex.so+00150538 http://secure-web.cisco.com/15wmunFtJy8RzDq9oVQoOhvMj4SqFWIMICnRxUk7kN3uyYtej40W1KAf2FgN8p-YHhCe94AM96CLuzs2_pg0h5a-wPhOcAbQDBbn9UroNugqM9zMNW_x85lUFfPpgR5eVTK_sVWwcg4CiDnJkgZm34QYRBZBTcAYN9riNJ9m1rpj4PKAxhbRXEmUfM_1qcroQ-tCUoHaYthJ1wh2oe_rXJu65oN57rZkO5uN2D-kO6NX50rAL6N-yYqFbQTvlWSoqZXcpaDvh0nH11oRbZSCgYQ/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmex.so%2B00150538 mexRunMexFile+00000090 [ 13] 0x00007f2b21dcc5c4 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmex.so+00136644 http://secure-web.cisco.com/1VNIP2TP7g_-k-V3EXmoqH3gSLCQPAVKDrJmmFHk4DSCIs8dpaPhlMZY3o1R2Gcl45b59huNzCHAuDXy3Jk_DTzSHWeoAdTGEyyL_kxblZnIJkrmRuC21lPT3uRUUA5F-hhCNI4L1ewaawelx52Ns4n9o9ra_oWhRf9AD84pTyjJnXGVX1FrlCKhr8xCI3BxucHGenwthYaUBlmin56HnLgin-otSEMgaMDZVIlfwdsJjpm_sB9ATY4IgK9GI4jaKI7g9MMLbHjEVqHgacPW6sw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmex.so%2B00136644 [ 14] 0x00007f2b21dcd414 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmex.so+00140308 http://secure-web.cisco.com/1DHyyF-k0XGkPk9gRiFdvyrzyhAwZmrJ8Vpas5l1bhBSmDpXf1DE5cQ_3mHR9xgFvggvUyK6nS-KPKUap_Y3PtkQxvO-b174nhgWgkAkhqF0GCz9M2ffTgT-YPppDR2yc8dr-rFkMth1BYS8tXsV0l1UcZ8aP_QkA_xu_XEQ-IULq2naXsfdbIOmnONEUC_6gpFEpp2_EkJr0prYDw63-Fcx2DNkGKP9H_lYz9w8au_3bwu-8Upbm2dSza-8ykxGxxKbsp1J3VugjWqfirkKTxg/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmex.so%2B00140308 [ 15] 0x00007f2b232ff329 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_dispatcher.so+00791337 http://secure-web.cisco.com/1YvAiBC_3G9VAawE4steKXeCaNTlrpgMnQG_qhwLeycblS635IsShf_UEZVAtvWU98ic7nFoyTObuenzWyfIOrdZ1ukAI2_Rwpr7BFODPD8xr8FVnAIglj8lndurD-18acdOLCAx9cl__2Xe2_21LZQn4auLKXubsYP6cvn7ODCEtX6tup_3H0vUFEZ4WQGRknJISa7pBZBc8A0cMb8ooCFDVafzDFjkSj4EiKd-9hl01YeUQPAu5Hwt6s7FUSKNmxksu_SyBfaeCpYE8OvqpHA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_dispatcher.so%2B00791337 _ZN8Mfh_file11dispatch_fhEiPP11mxArray$[ 16] 0x00007f2b2260fb70 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04053872 http://secure-web.cisco.com/1FqlnK1mbYe0fc4WrLh27McIgFcpF4caZpprfvWHGIiLLoxXo6_L3M8BINfHY5-jSh1ngRLTREAlaV-ecKWLXgaZmAvPaE1WcZ3K8NB0Vvxh-3_asNJndl8j3D5yqTCWCZygCAlsQE2BScTJzzzgOg0nDdICKmBjoe5NmIpTDU8e12QBMlVY4gLY59bk2WU5NEVeEhnmukrN_bzXIchegVXLsx6fumnKQzIoSHTfUwa7LAM4D8pzDWBH7hsRyezlzADNhYYUpmOqNOqn5JFOEDA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04053872 [ 17] 0x00007f2b225bfe02 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03726850 http://secure-web.cisco.com/1oFCMQbMq8_LNNSwavId3uL9KorlKBV-Dq9AH2k9--Ptuwe56v1f0M8oNm9UBgRvAQacl9RKg1Qg0DY7ko-IcvfQe-2sfN0qRBoXdPr8AINOFM5HQFjasYlRzdVlc-G_JqKNPbJEzsVRjfXLn9CA4BIE2htjH6A3_wsQTimZoAzJF_HNTmhJ7qA5E1fFaDN7kOubeJKvBSvnuTwu-bMBUREZA03ALLxwcXdU7Zf9awXp32KrUJr3sssPhgqjOZm0-uLmk2eWzYlnYg6SD7XCpag/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03726850 [ 18] 0x00007f2b225c2022 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03735586 http://secure-web.cisco.com/1mkHocgN-E2JcT6SI0pNs-oXMVy5k5oGB6gATPm9NI82pijbaPsiS_mVu6yD_8ldltWLoJH4dyPp4vYVPvfXnMD03lmxENx9NH-5f5d00CK147UzH945ZVfrdnKRmxtQZPQAbtHNrwjMC7s4lNIqHSR7GSaetK6V29YMKzu_-Tu1SwwBDg3JePYZjvodQRdYUkHEfs8YmahPAtNRQPM3MskmCOUcjL4tV6sdY1yfjwhrpmPrjlQKVXgKZQMDqosdS_VLmyb6B_maYrhrDgnW0aA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03735586 [ 19] 0x00007f2b225c7f87 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03760007 http://secure-web.cisco.com/1IXEh5f9oNhkKzllddjiYB3PrZZ0_a0EZYlGzFTPY7IyKerNHNEwXaFMOYZXMm4hct0Rom3hL_ou_TGy8UJSc7P-OrfKK0CrXSeDSR-7YEwoHUr9hq-a_cceHo-B4JS3oLxWaU0ykCPBleBOrFVoTgQHmHnKJTjxDY5GAIqCi48jEIy7iuEXH8AMIgvxL5dbjDgjN_qtXvhWG70-bIbaIS0j25znSUF0ho6j9W7Q-okSGwCZJ0YkWBJerVuCH5b3o_Rr2u-KSeDxXNKED0dtlBw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03760007 [ 20] 0x00007f2b225c36ff /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03741439 http://secure-web.cisco.com/1z7kRHrPDXQ2J89IxYNotG6f3AWl-VlFzlspUBbkrsL1gDgJbVg7Jvui01VXzy_9XgOLBM7uiNrNy2emqwnaZRVr97UmD81gSG0_F-eUpsqBkSrR3o5bOkcSlKSKbnIJLwrb7IlUi1lGu-eqqDsDfvtd8bmEZ9LWhsNqU63v-ByjHg8-Tppp8IHXCegbHJwtiYG5b7ldmmACZL3zXlOMT5m_Xf7vUxnL9hQ9AOVduNe9rwSJml83zaACIYRO7148iHaaWASzcChMIFktUQdn6DA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03741439 [ 21] 0x00007f2b225c4334 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03744564 http://secure-web.cisco.com/1Qidv5KKgCpV0A4yNcjeOaCG5BbPEneNCG_VGPSEeihppLC0K8VCKQKqgycrF_JG7hDWxESiIkJ0zZSKIoEcr9MBBq-zCjGrXAT3o-uxNgPfkPx2Diq5rB4I4Nj_5SOHSz67iis8FUiswPfla7T1ax5dsZbZqWNZzf3mRlN9H7qfLp7x9gNQlbo1DsK8hFvHTUGz_PM_4onSpO9CffOK0BfVEfeOpXOHy6EjznUeUWhuJyx6dorWoftGwaDXEKw44ZGcYPHdtnJXKpRfHp8TKpw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03744564 [ 22] 0x00007f2b2263952e /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04224302 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/export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03760007 http://secure-web.cisco.com/1IXEh5f9oNhkKzllddjiYB3PrZZ0_a0EZYlGzFTPY7IyKerNHNEwXaFMOYZXMm4hct0Rom3hL_ou_TGy8UJSc7P-OrfKK0CrXSeDSR-7YEwoHUr9hq-a_cceHo-B4JS3oLxWaU0ykCPBleBOrFVoTgQHmHnKJTjxDY5GAIqCi48jEIy7iuEXH8AMIgvxL5dbjDgjN_qtXvhWG70-bIbaIS0j25znSUF0ho6j9W7Q-okSGwCZJ0YkWBJerVuCH5b3o_Rr2u-KSeDxXNKED0dtlBw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03760007 [ 28] 0x00007f2b225c36ff /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03741439 http://secure-web.cisco.com/1z7kRHrPDXQ2J89IxYNotG6f3AWl-VlFzlspUBbkrsL1gDgJbVg7Jvui01VXzy_9XgOLBM7uiNrNy2emqwnaZRVr97UmD81gSG0_F-eUpsqBkSrR3o5bOkcSlKSKbnIJLwrb7IlUi1lGu-eqqDsDfvtd8bmEZ9LWhsNqU63v-ByjHg8-Tppp8IHXCegbHJwtiYG5b7ldmmACZL3zXlOMT5m_Xf7vUxnL9hQ9AOVduNe9rwSJml83zaACIYRO7148iHaaWASzcChMIFktUQdn6DA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03741439 [ 29] 0x00007f2b225c4334 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03744564 http://secure-web.cisco.com/1Qidv5KKgCpV0A4yNcjeOaCG5BbPEneNCG_VGPSEeihppLC0K8VCKQKqgycrF_JG7hDWxESiIkJ0zZSKIoEcr9MBBq-zCjGrXAT3o-uxNgPfkPx2Diq5rB4I4Nj_5SOHSz67iis8FUiswPfla7T1ax5dsZbZqWNZzf3mRlN9H7qfLp7x9gNQlbo1DsK8hFvHTUGz_PM_4onSpO9CffOK0BfVEfeOpXOHy6EjznUeUWhuJyx6dorWoftGwaDXEKw44ZGcYPHdtnJXKpRfHp8TKpw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03744564 [ 30] 0x00007f2b2263952e /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04224302 http://secure-web.cisco.com/1LFwdsCWta1IKYv3k3YydtSX7z6ZkdwRsguf-SFigI8Kxt4X2FK9QjJHavPcu2kTMH1M8_iHldk2sCDW-6Cw6fokp46WGvsOCfyh25z_jqednT1Bw_Rij1zigZ9QCabcdCHHrRmXYLySPYEVnuaTn22efOadhUo6Nk4TlR0yJ9IkLdzQFrQh_3bCoEoX8T_dZVAmOpLbfqeCTnXHh06TvfZx3I9xWFZvsuURivUTNG_DPyZpHm1y05pMXl4mY_b6ff5sdtFbOIGeh7kop0ZDDEw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04224302 [ 31] 0x00007f2b232ff329 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_dispatcher.so+00791337 http://secure-web.cisco.com/1YvAiBC_3G9VAawE4steKXeCaNTlrpgMnQG_qhwLeycblS635IsShf_UEZVAtvWU98ic7nFoyTObuenzWyfIOrdZ1ukAI2_Rwpr7BFODPD8xr8FVnAIglj8lndurD-18acdOLCAx9cl__2Xe2_21LZQn4auLKXubsYP6cvn7ODCEtX6tup_3H0vUFEZ4WQGRknJISa7pBZBc8A0cMb8ooCFDVafzDFjkSj4EiKd-9hl01YeUQPAu5Hwt6s7FUSKNmxksu_SyBfaeCpYE8OvqpHA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_dispatcher.so%2B00791337 _ZN8Mfh_file11dispatch_fhEiPP11mxArray$[ 32] 0x00007f2b225ecbf0 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03910640 http://secure-web.cisco.com/1XY2HS1eoFmCZj_0FLnEggB0qkNY41bJhNhIxrQkYQlfUUFOeH7A1s1kvm8DQWM0JlgCJOvl0vJiumfWqWZpNqcPopcWLIVMrGP89FTG4LxSpueiRrp0XpSeQ-vDq_Gp62up2g5nwwIVcmd7-oGNZmWQzFkkViXG0-KZbB3pU0t5L9QDBRtqK8nLjqVkLlKjqncDvdWTxmejTP9mpEj20zQuBbn_-88xbgdpbszqvtvKEThIjeHxG57d1SeK3JuQLoJ9FFtxjVfLmaIa15EmzgQ/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03910640 [ 33] 0x00007f2b225ec449 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03908681 http://secure-web.cisco.com/15RN_eXEIUAO_WqqYNIIAMljnNJvT34HmTcfAnwdPgjQ5Zs_ljlxOt3x13LTRvM7d5IunUlOUz5aKZ7GubCOSwKdOyfM_N8vvu2s8rcvMi_VSMoOHrf9PjqE-VmSGbzKW0i_9a6AXA6ZDjAeKelV7RTipDEECT6fzvwMMYPf94nguZ7fEEF4bMoM2nZHkvhvuZGI_ZTO8PGtiq5ntFL907fj7pH9SWOuz8Nk9t5X7rPPQ0ntQShuBYa89QKVU2cfmhQRoAogbmYs22gLetkR8ZQ/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03908681 [ 34] 0x00007f2b2252ffd6 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03137494 http://secure-web.cisco.com/1XibXIDoYPELJ8Qmp8ylDzLuf8aUubO7-jyooiQCEf8a082UlM2DJiqW5LaFdKT1yQJbxTKlXm1N_dBVMT-orB0SEIbRxWaLJDGWLozzZ8D-UhNRaYXYgWHAzjvA6draUI0HwfhbOmcDglBW0Q06X4mOA2cCvheWHU-rDg5mA3PdplDBSiG6JmbgZg-feiB947xEiq2BUD8ZrJe9j8XTPhjYBed6n1I_4WbG9tNT1YNCCpzNtFjBtVwnO-NTCN4QbXB2UmoKnv8og7_XILbQrEg/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03137494 inCallFcnWithTrap+00000086 [ 35] 0x00007f2b225b3c0b /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03677195 http://secure-web.cisco.com/1IAIH2i6-h19TW-GQXcC6sE7doC05sQYZagDqPgNU7ylypApwktFIOYKOoaKDLZKVt6j1FAmWztWJ2TpLtqqgQ_JPtZUaeDVOLW6CQR7hI9SuV0fizRPOBwBdGUHvBvKq2W35Tmj27nCuylilBfvIx_fAJmYZvwD8WFgDdLEl4sZmL812gt0QLdUyaJa5Av3bXoLMpCjFcB1nM8CY9SVYRn98cmJyTHQ5hRsVF0m8j3uzDgGf6cW5wRbtzDfQ2RQG8zgWtA8CAoUH_oMeziILfA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03677195

This error was detected while a MEX-file was running. If the MEX-file is not an official MathWorks function, please examine its source code for errors. Please consult the External Interfaces Guide for information on debugging MEX-files.

If this problem is reproducible, please submit a Service Request via: *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* http://secure-web.cisco.com/1Ed7iu6FKtFiNuMsZIiZfD9XcaKR4-ypGhi3w3Lwfv60-a2I... http://secure-web.cisco.com/1B8en4WQVOmBM-TonUpSzamw674QdqjI_ltVT2KdTcbPbuPW0K3Ay8KDhD5c4RCuwKYVmR07FjU0Aevx09ahCMeyv0JkXQ52Hmhwb4sx7s4JboH2NUrlUAj_t1NiR1NWXsdcBbrW2ARL_QZIvDtzEvCZllOY4TGkavTAZNKXychD1QqvsZFE-MKZXZcrP5pagoPPejJGw9gWjGYxJHuPexjzzMvAZ00KWwGungv_lBCKCFbVfyIShsbLN-xOO4h3eWRUjCNBh0HGJu8phyXt6Xg/http%3A%2F%2Fwww.mathworks.com%2Fsupport%2Fcontact_us%2F

A technical support engineer might contact you with further information.

Any insight or help you can provide is greatly appreciated. *Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park dcallow@umd.edu dcallow@gmail.com 443-254-6298

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Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1A8bx9DXo139MZ9fUyweH53j6yZXrv_4CRKnXmAPk9kBzdu...

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Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1A8bx9DXo139MZ9fUyweH53j6yZXrv_4CRKnXmAPk9kBzdu... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at http://secure-web.cisco.com/1kXgL-61ri7LvFmAdiWTLJybvYn_lfanoeiv2-s7_Rk5FDIa... . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.

External Email - Use Caution

Sure, what is the best way to share it with you? and which folders/files should I send?

On Fri, May 28, 2021 at 3:28 PM Iglesias Gonzalez, Juan E. < JIGLESIASGONZALEZ@mgh.harvard.edu> wrote:

It seems the linear registration is dying. Would you mind sharing the subject, please? Cheers, /E Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://secure-web.cisco.com/1gT1t332MrjlumWoLsCvCODpcjL_Q7MljRoRdHSVXsW_jLPg...

On May 28, 2021, at 12:20, Daniel Davidson Callow dcallow@umd.edu wrote:

    External Email - Use Caution

Hello Juan,

I am using data from the HCP aging dataset which has a T1 and a high-resolution hippocampal scan (T2).

Yes, it does seem that the T2 and T1's are roughly aligned to each other. It seems like it has something to do with the creation of the tmp/hippoSF_T1T2_v21_highres_left/ folder where the program is expecting something to be produced that is not there/hasn't been produced.

Again, here is an example of the code output/error.

@ linenum = 1 cd /data/bswift-1/dcallow/aging/freesurfer set subj= ( HCA8587705_V1_MR ) rm: No match. rm -rf /a/ha-nfs-2-ib/export/data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/scripts/IsRunning.lh+rh cd /data/bswift-1/dcallow/aging/freesurfer echo HCA8587705_V1_MR HCA8587705_V1_MR segmentHA_T2.sh HCA8587705_V1_MR /data/bswift-1/dcallow/aging/imaging/HCA8587705_V1_MR/unprocessed/TSE_HiResHp/HCA8587705_V1_MR_TSE_HiResHp.nii.gz highres 1 #-------------------------------------------- #@# Hippocampal Subfields processing (T1+T2) left Fri May 28 12:05:35 EDT 2021

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Setting up environment variables

INFO: error loading libraries in default configuration, trying with MCR libraries only LD_LIBRARY_PATH is .:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//runtime/glnxa64:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//bin/glnxa64:/data/bswif$Registering norm.mgz to additional volume No more processes. ERROR: could not open /data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/tmp/hippoSF_T1T2_v21_highres_left/41244773_norm__502687.mgh for reading ERROR: loading /data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/tmp/hippoSF_T1T2_v21_highres_left/41244773_norm__502687.mgh as MGH Warning: File '/data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/tmp/hippoSF_T1T2_v21_highres_left/41244773_norm__502687.mgh' not found. [^H> In myMRIread at 64 In segmentSubjectT1T2_autoEstimateAlveusML at 186]^H Attempt to reference field of non-structure array.

Error in segmentSubjectT1T2_autoEstimateAlveusML (line 188) MATLAB:nonStrucReference @#@FSTIME 2021:05:28:12:05:35 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 e 7.49 S 0.61 U 6.79 P 98% M 283156 F 0 R 84320 W 0 c 2392 w 9596 I 0 O 85080 L 5$@#@FSLOADPOST 2021:05:28:12:05:42 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 60.45 53.15 38.08 Linux compute-4-33.bswift.umd.edu http://secure-web.cisco.com/1sqdwOUu2B9k20N1ZAF2G3AjMOwj2lJePh4GNFQiYhImRJsLReMbcU3SXEBp36HD81jqxGdU8a11rJylMhtgbY4fajAEU2pMYsr0DVpWBlkaOMa76fsceUrIl9aQQGsiXc4t6jAY6yGgeO2kzpjftDgTb1eWEbDGuGccb2HunIGkKRrj0yIIhMCUBXNMsPGxCpYhRthsOcBxVagqqmQZxB5PmjkPPc4BKyyMN_eLiZEjt4ui6aNQG76WiX_3leabsXT0Dc4AQ7eKoT8OWNqqHcQ/http%3A%2F%2Fcompute-4-33.bswift.umd.edu 2.6.32-754.30.2.el6.x86_64 #1 SMP Fri May 29 04:45:43 EDT 2020 x86_64 x86_64 x86_64 GNU/Linux

T2 hippocampal subfields exited with ERRORS at Fri May 28 12:05:42 EDT 2021

For more details, see the log file /data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/scripts/hippocampal-subfields-T2.highres.log

Any ideas what might be causing this error. Again, it seems to be working for a small subset of participants however, the majority are failing with this error. *Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park dcallow@umd.edu dcallow@gmail.com 443-254-6298

On Fri, May 28, 2021 at 9:32 AM Iglesias Gonzalez, Juan E. < JIGLESIASGONZALEZ@mgh.harvard.edu> wrote:

Dear Daniel,

...

Are the T2s and T1s roughly aligned in RAS (physical coordinates)? In other words: do they (roughly) overlap when you open them together in Freeview?

Cheers,

/E

...

Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT)

*MailScanner has detected a possible fraud attempt from

...

"secure-web.cisco.com" claiming to be* http://secure-web.cisco.com/1gT1t332MrjlumWoLsCvCODpcjL_Q7MljRoRdHSVXsW_jLPg... http://secure-web.cisco.com/1M43tYnBIwe0As03lwnAGcBzSZfvIXhP_UsjatHKyZUaaQ4wSAHDh_rwH1615JlqcHfPYywTwRzVbI_to9hVZq--leXJy2p4Zrh_mUI3lNII4SXa870Dh3HPFfDvztZQqR8Lzb5jZgrooucfAyVmWEBNMCuB8-mMhkfQpliBwpQ4AlrLgpwXKROaATxslozZ45t7me-SsaBv2pGfPGHhefMDQiyWYTTwRkiWX5UsaBqKv7GznpWuae2cijb7yGp0Ot534fYLsrPfsPuzrmK7NMQ/http%3A%2F%2Fwww.jeiglesias.com

On May 28, 2021, at 07:53, Daniel Davidson Callow dcallow@umd.edu wrote:

    External Email - Use Caution

Hello,

I am running into errors when running

segmentHA_T2.sh ${subj} /data/bswift-1/dcallow/aging/freesurfer/${subj}/mri/T2.norm.mgz T2 1

Approximately 10% of my subjects are being processed but for some reason, the majority fail to execute. Here is an output from the error log.

---

USER dcallow HOST compute-4-32.bswift.umd.edu http://secure-web.cisco.com/1ypL43FxiKSZvppDyGttq1kG6jN0GRt9e8cgB2S5Z-8zCzVaVM-bCkayzZxY9xDU_KpcZcFWAPDqh90GDmfaCegId3XT6PKwKdcFIZXP27qvAGlubWjMrtSWPUClEYijiXXbemw4pG8RKDOZj6DPjOltVe5yMFHmf90ukT3OUKeqf7sTx70vaHCRaffDJe-yRzF5oO2Dnqy3JYjPkwjI1FW999MJQXWT6pjT1rnDxOkwbjKhl9FNrKXzV8OI9YJB12uI0m5B759UFLn4F9vrPog/http%3A%2F%2Fcompute-4-32.bswift.umd.edu PROCESSID 4033 PROCESSOR x86_64 OS Linux Linux compute-4-32.bswift.umd.edu http://secure-web.cisco.com/1ypL43FxiKSZvppDyGttq1kG6jN0GRt9e8cgB2S5Z-8zCzVaVM-bCkayzZxY9xDU_KpcZcFWAPDqh90GDmfaCegId3XT6PKwKdcFIZXP27qvAGlubWjMrtSWPUClEYijiXXbemw4pG8RKDOZj6DPjOltVe5yMFHmf90ukT3OUKeqf7sTx70vaHCRaffDJe-yRzF5oO2Dnqy3JYjPkwjI1FW999MJQXWT6pjT1rnDxOkwbjKhl9FNrKXzV8OI9YJB12uI0m5B759UFLn4F9vrPog/http%3A%2F%2Fcompute-4-32.bswift.umd.edu 2.6.32-754.35.1.el6.x86_64

#1 SMP Wed Sep 16 06:48:01 EDT 2020 x86_64 x86_64 x86_64 GNU/Linux

#-------------------------------------------- #@# Hippocampal Subfields processing (T1+T2) left Thu May 27 21:39:51 EDT 2021

---

Setting up environment variables

INFO: error loading libraries in default configuration, trying with MCR libraries only LD_LIBRARY_PATH is .:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//runtime/glnxa64:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//bin/glnxa64:/data/bswift-0$Registering norm.mgz to additional volume makeIsotropic WARNING: not different enough, won't reslice! No more processes. ERROR: could not open /data/bswift-1/dcallow/aging/freesurfer/HCA8537992_V1_MR/tmp/hippoSF_T1T2_v21_T2_left/23207174_T2resampledLikeT1__353506.mgh for reading ERROR: loading /data/bswift-1/dcallow/aging/freesurfer/HCA8537992_V1_MR/tmp/hippoSF_T1T2_v21_T2_left/23207174_T2resampledLikeT1__353506.mgh as MGH Warning: File '/data/bswift-1/dcallow/aging/freesurfer/HCA8537992_V1_MR/tmp/hippoSF_T1T2_v21_T2_left/23207174_T2resampledLikeT1__353506.mgh' not found. [^H> In myMRIread at 64 In segmentSubjectT1T2_autoEstimateAlveusML at 207]^H Attempt to reference field of non-structure array.

Error in segmentSubjectT1T2_autoEstimateAlveusML (line 211)

MATLAB:nonStrucReference @#@FSTIME 2021:05:27:21:39:51 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 e 334.41 S 1.15 U 8.61 P 2% M 818424 F 0 R 185834 W 0 c 2541 w 20306 I 0 O 216480 L $@#@FSLOADPOST 2021:05:27:21:45:25 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 31.22 29.74 28.95 Linux compute-4-32.bswift.umd.edu http://secure-web.cisco.com/1ypL43FxiKSZvppDyGttq1kG6jN0GRt9e8cgB2S5Z-8zCzVaVM-bCkayzZxY9xDU_KpcZcFWAPDqh90GDmfaCegId3XT6PKwKdcFIZXP27qvAGlubWjMrtSWPUClEYijiXXbemw4pG8RKDOZj6DPjOltVe5yMFHmf90ukT3OUKeqf7sTx70vaHCRaffDJe-yRzF5oO2Dnqy3JYjPkwjI1FW999MJQXWT6pjT1rnDxOkwbjKhl9FNrKXzV8OI9YJB12uI0m5B759UFLn4F9vrPog/http%3A%2F%2Fcompute-4-32.bswift.umd.edu 2.6.32-754.35.1.el6.x86_64 #1 SMP Wed Sep 16 06:48:01 EDT 2020 x86_64 x86_64 x86_64 GNU/Linux

T2 hippocampal subfields exited with ERRORS at Thu May 27 21:45:25 EDT 2021

I am also getting a matlab_crash_dump file

---

   Segmentation violation detected at Thu May 27 21:51:52 2021

---

Configuration: Crash Decoding : Disabled Current Visual : None Default Encoding : US-ASCII GNU C Library : 2.12 stable MATLAB Architecture: glnxa64 MATLAB Root : /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux http://secure-web.cisco.com/1zf_ot3cQGUvMhTgphfJ7towMivhNxWKqA3AayyU_OPHHiMasb-EvBGTFN3sYYJDfq2OTyGKzBZ_szFAJCXZHlZGEtJjl-Jdhb4Q1bIAonDtiewkPoyMXUpsAcQaKfsBE0RsmUc-YGdemu96LMj476x2UIb3GfDNjDVx7ULnA6ydsfS5RHTfxedRiKFt6oLIZ-8AmzrNc44dziwIEz2Tm1zVXkZba_ISfg8fwql2KxoL8WGjCE7_3XIDrEbE-HNmMPhnNu3asRalw0_AJ6BOTkA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux MATLAB Version : 8.4.0.150421 (R2014b) Operating System : Linux 2.6.32-754.30.2.el6.x86_64 #1 SMP Fri May 29 04:45:43 EDT 2020 x86_64 Processor ID : x86 Family 6 Model 62 Stepping 4, GenuineIntel Software OpenGL : 0 Virtual Machine : Java 1.7.0_11-b21 with Oracle Corporation Java HotSpot(TM) 64-Bit Server VM mixed mode Window System : No active display

Fault Count: 1

Abnormal termination: Segmentation violation

Stack Trace (from fault): [ 0] 0x00007f2b30f06213 /lib64/libpthread.so.0+00033299 pthread_join+00000035 [ 1] 0x00007f2a9f4d847d /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 2] 0x00007f2a9f4d8cac /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 3] 0x00007f2a9f5cae63 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 4] 0x00007f2a9f5af896 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 5] 0x00007f2a9f5a6b8d /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 6] 0x00007f2a9f5a6fd0 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 7] 0x00007f2a9f5aad00 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 8] 0x00007f2a9f5a5c3c /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 9] 0x00007f2a9f44fb03 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 10] 0x00007f2a9f42b9cc /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 11] 0x00007f2a9f42b132 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 12] 0x00007f2b21dcfc0a /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmex.so+00150538 http://secure-web.cisco.com/15wmunFtJy8RzDq9oVQoOhvMj4SqFWIMICnRxUk7kN3uyYtej40W1KAf2FgN8p-YHhCe94AM96CLuzs2_pg0h5a-wPhOcAbQDBbn9UroNugqM9zMNW_x85lUFfPpgR5eVTK_sVWwcg4CiDnJkgZm34QYRBZBTcAYN9riNJ9m1rpj4PKAxhbRXEmUfM_1qcroQ-tCUoHaYthJ1wh2oe_rXJu65oN57rZkO5uN2D-kO6NX50rAL6N-yYqFbQTvlWSoqZXcpaDvh0nH11oRbZSCgYQ/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmex.so%2B00150538 mexRunMexFile+00000090 [ 13] 0x00007f2b21dcc5c4 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmex.so+00136644 http://secure-web.cisco.com/1VNIP2TP7g_-k-V3EXmoqH3gSLCQPAVKDrJmmFHk4DSCIs8dpaPhlMZY3o1R2Gcl45b59huNzCHAuDXy3Jk_DTzSHWeoAdTGEyyL_kxblZnIJkrmRuC21lPT3uRUUA5F-hhCNI4L1ewaawelx52Ns4n9o9ra_oWhRf9AD84pTyjJnXGVX1FrlCKhr8xCI3BxucHGenwthYaUBlmin56HnLgin-otSEMgaMDZVIlfwdsJjpm_sB9ATY4IgK9GI4jaKI7g9MMLbHjEVqHgacPW6sw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmex.so%2B00136644 [ 14] 0x00007f2b21dcd414 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmex.so+00140308 http://secure-web.cisco.com/1DHyyF-k0XGkPk9gRiFdvyrzyhAwZmrJ8Vpas5l1bhBSmDpXf1DE5cQ_3mHR9xgFvggvUyK6nS-KPKUap_Y3PtkQxvO-b174nhgWgkAkhqF0GCz9M2ffTgT-YPppDR2yc8dr-rFkMth1BYS8tXsV0l1UcZ8aP_QkA_xu_XEQ-IULq2naXsfdbIOmnONEUC_6gpFEpp2_EkJr0prYDw63-Fcx2DNkGKP9H_lYz9w8au_3bwu-8Upbm2dSza-8ykxGxxKbsp1J3VugjWqfirkKTxg/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmex.so%2B00140308 [ 15] 0x00007f2b232ff329 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_dispatcher.so+00791337 http://secure-web.cisco.com/1YvAiBC_3G9VAawE4steKXeCaNTlrpgMnQG_qhwLeycblS635IsShf_UEZVAtvWU98ic7nFoyTObuenzWyfIOrdZ1ukAI2_Rwpr7BFODPD8xr8FVnAIglj8lndurD-18acdOLCAx9cl__2Xe2_21LZQn4auLKXubsYP6cvn7ODCEtX6tup_3H0vUFEZ4WQGRknJISa7pBZBc8A0cMb8ooCFDVafzDFjkSj4EiKd-9hl01YeUQPAu5Hwt6s7FUSKNmxksu_SyBfaeCpYE8OvqpHA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_dispatcher.so%2B00791337 _ZN8Mfh_file11dispatch_fhEiPP11mxArray$[ 16] 0x00007f2b2260fb70 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04053872 http://secure-web.cisco.com/1FqlnK1mbYe0fc4WrLh27McIgFcpF4caZpprfvWHGIiLLoxXo6_L3M8BINfHY5-jSh1ngRLTREAlaV-ecKWLXgaZmAvPaE1WcZ3K8NB0Vvxh-3_asNJndl8j3D5yqTCWCZygCAlsQE2BScTJzzzgOg0nDdICKmBjoe5NmIpTDU8e12QBMlVY4gLY59bk2WU5NEVeEhnmukrN_bzXIchegVXLsx6fumnKQzIoSHTfUwa7LAM4D8pzDWBH7hsRyezlzADNhYYUpmOqNOqn5JFOEDA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04053872 [ 17] 0x00007f2b225bfe02 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03726850 http://secure-web.cisco.com/1oFCMQbMq8_LNNSwavId3uL9KorlKBV-Dq9AH2k9--Ptuwe56v1f0M8oNm9UBgRvAQacl9RKg1Qg0DY7ko-IcvfQe-2sfN0qRBoXdPr8AINOFM5HQFjasYlRzdVlc-G_JqKNPbJEzsVRjfXLn9CA4BIE2htjH6A3_wsQTimZoAzJF_HNTmhJ7qA5E1fFaDN7kOubeJKvBSvnuTwu-bMBUREZA03ALLxwcXdU7Zf9awXp32KrUJr3sssPhgqjOZm0-uLmk2eWzYlnYg6SD7XCpag/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03726850 [ 18] 0x00007f2b225c2022 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03735586 http://secure-web.cisco.com/1mkHocgN-E2JcT6SI0pNs-oXMVy5k5oGB6gATPm9NI82pijbaPsiS_mVu6yD_8ldltWLoJH4dyPp4vYVPvfXnMD03lmxENx9NH-5f5d00CK147UzH945ZVfrdnKRmxtQZPQAbtHNrwjMC7s4lNIqHSR7GSaetK6V29YMKzu_-Tu1SwwBDg3JePYZjvodQRdYUkHEfs8YmahPAtNRQPM3MskmCOUcjL4tV6sdY1yfjwhrpmPrjlQKVXgKZQMDqosdS_VLmyb6B_maYrhrDgnW0aA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03735586 [ 19] 0x00007f2b225c7f87 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03760007 http://secure-web.cisco.com/1IXEh5f9oNhkKzllddjiYB3PrZZ0_a0EZYlGzFTPY7IyKerNHNEwXaFMOYZXMm4hct0Rom3hL_ou_TGy8UJSc7P-OrfKK0CrXSeDSR-7YEwoHUr9hq-a_cceHo-B4JS3oLxWaU0ykCPBleBOrFVoTgQHmHnKJTjxDY5GAIqCi48jEIy7iuEXH8AMIgvxL5dbjDgjN_qtXvhWG70-bIbaIS0j25znSUF0ho6j9W7Q-okSGwCZJ0YkWBJerVuCH5b3o_Rr2u-KSeDxXNKED0dtlBw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03760007 [ 20] 0x00007f2b225c36ff /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03741439 http://secure-web.cisco.com/1z7kRHrPDXQ2J89IxYNotG6f3AWl-VlFzlspUBbkrsL1gDgJbVg7Jvui01VXzy_9XgOLBM7uiNrNy2emqwnaZRVr97UmD81gSG0_F-eUpsqBkSrR3o5bOkcSlKSKbnIJLwrb7IlUi1lGu-eqqDsDfvtd8bmEZ9LWhsNqU63v-ByjHg8-Tppp8IHXCegbHJwtiYG5b7ldmmACZL3zXlOMT5m_Xf7vUxnL9hQ9AOVduNe9rwSJml83zaACIYRO7148iHaaWASzcChMIFktUQdn6DA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03741439 [ 21] 0x00007f2b225c4334 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03744564 http://secure-web.cisco.com/1Qidv5KKgCpV0A4yNcjeOaCG5BbPEneNCG_VGPSEeihppLC0K8VCKQKqgycrF_JG7hDWxESiIkJ0zZSKIoEcr9MBBq-zCjGrXAT3o-uxNgPfkPx2Diq5rB4I4Nj_5SOHSz67iis8FUiswPfla7T1ax5dsZbZqWNZzf3mRlN9H7qfLp7x9gNQlbo1DsK8hFvHTUGz_PM_4onSpO9CffOK0BfVEfeOpXOHy6EjznUeUWhuJyx6dorWoftGwaDXEKw44ZGcYPHdtnJXKpRfHp8TKpw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03744564 [ 22] 0x00007f2b2263952e /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04224302 http://secure-web.cisco.com/1LFwdsCWta1IKYv3k3YydtSX7z6ZkdwRsguf-SFigI8Kxt4X2FK9QjJHavPcu2kTMH1M8_iHldk2sCDW-6Cw6fokp46WGvsOCfyh25z_jqednT1Bw_Rij1zigZ9QCabcdCHHrRmXYLySPYEVnuaTn22efOadhUo6Nk4TlR0yJ9IkLdzQFrQh_3bCoEoX8T_dZVAmOpLbfqeCTnXHh06TvfZx3I9xWFZvsuURivUTNG_DPyZpHm1y05pMXl4mY_b6ff5sdtFbOIGeh7kop0ZDDEw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04224302 [ 23] 0x00007f2b232ff329 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_dispatcher.so+00791337 http://secure-web.cisco.com/1YvAiBC_3G9VAawE4steKXeCaNTlrpgMnQG_qhwLeycblS635IsShf_UEZVAtvWU98ic7nFoyTObuenzWyfIOrdZ1ukAI2_Rwpr7BFODPD8xr8FVnAIglj8lndurD-18acdOLCAx9cl__2Xe2_21LZQn4auLKXubsYP6cvn7ODCEtX6tup_3H0vUFEZ4WQGRknJISa7pBZBc8A0cMb8ooCFDVafzDFjkSj4EiKd-9hl01YeUQPAu5Hwt6s7FUSKNmxksu_SyBfaeCpYE8OvqpHA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_dispatcher.so%2B00791337 _ZN8Mfh_file11dispatch_fhEiPP11mxArray$[ 24] 0x00007f2b2260fb70 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04053872 http://secure-web.cisco.com/1FqlnK1mbYe0fc4WrLh27McIgFcpF4caZpprfvWHGIiLLoxXo6_L3M8BINfHY5-jSh1ngRLTREAlaV-ecKWLXgaZmAvPaE1WcZ3K8NB0Vvxh-3_asNJndl8j3D5yqTCWCZygCAlsQE2BScTJzzzgOg0nDdICKmBjoe5NmIpTDU8e12QBMlVY4gLY59bk2WU5NEVeEhnmukrN_bzXIchegVXLsx6fumnKQzIoSHTfUwa7LAM4D8pzDWBH7hsRyezlzADNhYYUpmOqNOqn5JFOEDA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04053872 [ 25] 0x00007f2b225bfe02 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03726850 http://secure-web.cisco.com/1oFCMQbMq8_LNNSwavId3uL9KorlKBV-Dq9AH2k9--Ptuwe56v1f0M8oNm9UBgRvAQacl9RKg1Qg0DY7ko-IcvfQe-2sfN0qRBoXdPr8AINOFM5HQFjasYlRzdVlc-G_JqKNPbJEzsVRjfXLn9CA4BIE2htjH6A3_wsQTimZoAzJF_HNTmhJ7qA5E1fFaDN7kOubeJKvBSvnuTwu-bMBUREZA03ALLxwcXdU7Zf9awXp32KrUJr3sssPhgqjOZm0-uLmk2eWzYlnYg6SD7XCpag/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03726850 [ 26] 0x00007f2b225c2022 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03735586 http://secure-web.cisco.com/1mkHocgN-E2JcT6SI0pNs-oXMVy5k5oGB6gATPm9NI82pijbaPsiS_mVu6yD_8ldltWLoJH4dyPp4vYVPvfXnMD03lmxENx9NH-5f5d00CK147UzH945ZVfrdnKRmxtQZPQAbtHNrwjMC7s4lNIqHSR7GSaetK6V29YMKzu_-Tu1SwwBDg3JePYZjvodQRdYUkHEfs8YmahPAtNRQPM3MskmCOUcjL4tV6sdY1yfjwhrpmPrjlQKVXgKZQMDqosdS_VLmyb6B_maYrhrDgnW0aA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03735586 [ 27] 0x00007f2b225c7f87 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03760007 http://secure-web.cisco.com/1IXEh5f9oNhkKzllddjiYB3PrZZ0_a0EZYlGzFTPY7IyKerNHNEwXaFMOYZXMm4hct0Rom3hL_ou_TGy8UJSc7P-OrfKK0CrXSeDSR-7YEwoHUr9hq-a_cceHo-B4JS3oLxWaU0ykCPBleBOrFVoTgQHmHnKJTjxDY5GAIqCi48jEIy7iuEXH8AMIgvxL5dbjDgjN_qtXvhWG70-bIbaIS0j25znSUF0ho6j9W7Q-okSGwCZJ0YkWBJerVuCH5b3o_Rr2u-KSeDxXNKED0dtlBw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03760007 [ 28] 0x00007f2b225c36ff /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03741439 http://secure-web.cisco.com/1z7kRHrPDXQ2J89IxYNotG6f3AWl-VlFzlspUBbkrsL1gDgJbVg7Jvui01VXzy_9XgOLBM7uiNrNy2emqwnaZRVr97UmD81gSG0_F-eUpsqBkSrR3o5bOkcSlKSKbnIJLwrb7IlUi1lGu-eqqDsDfvtd8bmEZ9LWhsNqU63v-ByjHg8-Tppp8IHXCegbHJwtiYG5b7ldmmACZL3zXlOMT5m_Xf7vUxnL9hQ9AOVduNe9rwSJml83zaACIYRO7148iHaaWASzcChMIFktUQdn6DA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03741439 [ 29] 0x00007f2b225c4334 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03744564 http://secure-web.cisco.com/1Qidv5KKgCpV0A4yNcjeOaCG5BbPEneNCG_VGPSEeihppLC0K8VCKQKqgycrF_JG7hDWxESiIkJ0zZSKIoEcr9MBBq-zCjGrXAT3o-uxNgPfkPx2Diq5rB4I4Nj_5SOHSz67iis8FUiswPfla7T1ax5dsZbZqWNZzf3mRlN9H7qfLp7x9gNQlbo1DsK8hFvHTUGz_PM_4onSpO9CffOK0BfVEfeOpXOHy6EjznUeUWhuJyx6dorWoftGwaDXEKw44ZGcYPHdtnJXKpRfHp8TKpw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03744564 [ 30] 0x00007f2b2263952e /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04224302 http://secure-web.cisco.com/1LFwdsCWta1IKYv3k3YydtSX7z6ZkdwRsguf-SFigI8Kxt4X2FK9QjJHavPcu2kTMH1M8_iHldk2sCDW-6Cw6fokp46WGvsOCfyh25z_jqednT1Bw_Rij1zigZ9QCabcdCHHrRmXYLySPYEVnuaTn22efOadhUo6Nk4TlR0yJ9IkLdzQFrQh_3bCoEoX8T_dZVAmOpLbfqeCTnXHh06TvfZx3I9xWFZvsuURivUTNG_DPyZpHm1y05pMXl4mY_b6ff5sdtFbOIGeh7kop0ZDDEw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04224302 [ 31] 0x00007f2b232ff329 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_dispatcher.so+00791337 http://secure-web.cisco.com/1YvAiBC_3G9VAawE4steKXeCaNTlrpgMnQG_qhwLeycblS635IsShf_UEZVAtvWU98ic7nFoyTObuenzWyfIOrdZ1ukAI2_Rwpr7BFODPD8xr8FVnAIglj8lndurD-18acdOLCAx9cl__2Xe2_21LZQn4auLKXubsYP6cvn7ODCEtX6tup_3H0vUFEZ4WQGRknJISa7pBZBc8A0cMb8ooCFDVafzDFjkSj4EiKd-9hl01YeUQPAu5Hwt6s7FUSKNmxksu_SyBfaeCpYE8OvqpHA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_dispatcher.so%2B00791337 _ZN8Mfh_file11dispatch_fhEiPP11mxArray$[ 32] 0x00007f2b225ecbf0 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03910640 http://secure-web.cisco.com/1XY2HS1eoFmCZj_0FLnEggB0qkNY41bJhNhIxrQkYQlfUUFOeH7A1s1kvm8DQWM0JlgCJOvl0vJiumfWqWZpNqcPopcWLIVMrGP89FTG4LxSpueiRrp0XpSeQ-vDq_Gp62up2g5nwwIVcmd7-oGNZmWQzFkkViXG0-KZbB3pU0t5L9QDBRtqK8nLjqVkLlKjqncDvdWTxmejTP9mpEj20zQuBbn_-88xbgdpbszqvtvKEThIjeHxG57d1SeK3JuQLoJ9FFtxjVfLmaIa15EmzgQ/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03910640 [ 33] 0x00007f2b225ec449 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03908681 http://secure-web.cisco.com/15RN_eXEIUAO_WqqYNIIAMljnNJvT34HmTcfAnwdPgjQ5Zs_ljlxOt3x13LTRvM7d5IunUlOUz5aKZ7GubCOSwKdOyfM_N8vvu2s8rcvMi_VSMoOHrf9PjqE-VmSGbzKW0i_9a6AXA6ZDjAeKelV7RTipDEECT6fzvwMMYPf94nguZ7fEEF4bMoM2nZHkvhvuZGI_ZTO8PGtiq5ntFL907fj7pH9SWOuz8Nk9t5X7rPPQ0ntQShuBYa89QKVU2cfmhQRoAogbmYs22gLetkR8ZQ/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03908681 [ 34] 0x00007f2b2252ffd6 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03137494 http://secure-web.cisco.com/1XibXIDoYPELJ8Qmp8ylDzLuf8aUubO7-jyooiQCEf8a082UlM2DJiqW5LaFdKT1yQJbxTKlXm1N_dBVMT-orB0SEIbRxWaLJDGWLozzZ8D-UhNRaYXYgWHAzjvA6draUI0HwfhbOmcDglBW0Q06X4mOA2cCvheWHU-rDg5mA3PdplDBSiG6JmbgZg-feiB947xEiq2BUD8ZrJe9j8XTPhjYBed6n1I_4WbG9tNT1YNCCpzNtFjBtVwnO-NTCN4QbXB2UmoKnv8og7_XILbQrEg/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03137494 inCallFcnWithTrap+00000086 [ 35] 0x00007f2b225b3c0b /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03677195 http://secure-web.cisco.com/1IAIH2i6-h19TW-GQXcC6sE7doC05sQYZagDqPgNU7ylypApwktFIOYKOoaKDLZKVt6j1FAmWztWJ2TpLtqqgQ_JPtZUaeDVOLW6CQR7hI9SuV0fizRPOBwBdGUHvBvKq2W35Tmj27nCuylilBfvIx_fAJmYZvwD8WFgDdLEl4sZmL812gt0QLdUyaJa5Av3bXoLMpCjFcB1nM8CY9SVYRn98cmJyTHQ5hRsVF0m8j3uzDgGf6cW5wRbtzDfQ2RQG8zgWtA8CAoUH_oMeziILfA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03677195

This error was detected while a MEX-file was running. If the MEX-file is not an official MathWorks function, please examine its source code for errors. Please consult the External Interfaces Guide for information on debugging MEX-files.

If this problem is reproducible, please submit a Service Request via: *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* http://secure-web.cisco.com/1ToP028W189wddEaTLTOlStcqTkqBXXpwQm5XlMzJrck9Hq2... http://secure-web.cisco.com/1B8en4WQVOmBM-TonUpSzamw674QdqjI_ltVT2KdTcbPbuPW0K3Ay8KDhD5c4RCuwKYVmR07FjU0Aevx09ahCMeyv0JkXQ52Hmhwb4sx7s4JboH2NUrlUAj_t1NiR1NWXsdcBbrW2ARL_QZIvDtzEvCZllOY4TGkavTAZNKXychD1QqvsZFE-MKZXZcrP5pagoPPejJGw9gWjGYxJHuPexjzzMvAZ00KWwGungv_lBCKCFbVfyIShsbLN-xOO4h3eWRUjCNBh0HGJu8phyXt6Xg/http%3A%2F%2Fwww.mathworks.com%2Fsupport%2Fcontact_us%2F

A technical support engineer might contact you with further information.

Any insight or help you can provide is greatly appreciated. *Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park dcallow@umd.edu dcallow@gmail.com 443-254-6298

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Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu

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External Email - Use Caution

Okay.

I tried the following file. HCA8133362_V1_MR.zip

ftp> put HCA8133362_V1_MR.zip

200 PORT command successful. Consider using PASV.

425 Failed to establish connection.

ftp>

ftp> put HCA8133362_V1_MR.zip

200 PORT command successful. Consider using PASV.

553 Could not create file.

I am unsure if it was uploaded correctly. If so please look at the Take a look at the hippocampal-subfields-T2-highres.log for the command that failed. For some reason, the T2 and Highres versions seemed to work for different subjects.

*Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park dcallow@umd.edu dcallow@gmail.com 443-254-6298

On Fri, May 28, 2021 at 4:10 PM Iglesias Gonzalez, Juan E. < JIGLESIASGONZALEZ@mgh.harvard.edu> wrote:

Please compress the whole subject directory and upload it to the ftp https://secure-web.cisco.com/17V8syWMVTKaaQhcS6MhcEk3ryPp1_XzTsJDwNhfnSpz5-q... Cheers, /E

Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://secure-web.cisco.com/1XIQD_seUELoMBl32vITG_77ibtO3YwKokZL9vz-PcxXYRKf...

On May 28, 2021, at 15:35, Daniel Davidson Callow dcallow@umd.edu wrote:

    External Email - Use Caution

Sure, what is the best way to share it with you? and which folders/files should I send?

On Fri, May 28, 2021 at 3:28 PM Iglesias Gonzalez, Juan E. < JIGLESIASGONZALEZ@mgh.harvard.edu> wrote:

...

It seems the linear registration is dying. Would you mind sharing the subject, please? Cheers, /E Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* http://secure-web.cisco.com/1XIQD_seUELoMBl32vITG_77ibtO3YwKokZL9vz-PcxXYRKf... http://secure-web.cisco.com/1gT1t332MrjlumWoLsCvCODpcjL_Q7MljRoRdHSVXsW_jLPgjmaoLw7W3F0bWnNAuU_i6YcvUn1CduipTCLoLmI28KrJsxObJ-pJjn0aT42elUDeQDY-VOqdDAsm_XCSLk6O0cQQsHQZ_WeLdLkkSP0ZqAF22pxtjRYWOS_mGB4DgjcwDWt2LSx_Vl4dfFH7q6x0dS6wAUxGejm01T0GyOn03KUjtR1Y7XZ1AVi0U9kSfev4sOmBR8c1iZDmEC4jy_1ZRJ6fDyEI8ZlK8tFektA/http%3A%2F%2Fwww.jeiglesias.com

On May 28, 2021, at 12:20, Daniel Davidson Callow dcallow@umd.edu wrote:

    External Email - Use Caution

Hello Juan,

I am using data from the HCP aging dataset which has a T1 and a high-resolution hippocampal scan (T2).

Yes, it does seem that the T2 and T1's are roughly aligned to each other. It seems like it has something to do with the creation of the tmp/hippoSF_T1T2_v21_highres_left/ folder where the program is expecting something to be produced that is not there/hasn't been produced.

Again, here is an example of the code output/error.

@ linenum = 1 cd /data/bswift-1/dcallow/aging/freesurfer set subj= ( HCA8587705_V1_MR ) rm: No match. rm -rf /a/ha-nfs-2-ib/export/data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/scripts/IsRunning.lh+rh cd /data/bswift-1/dcallow/aging/freesurfer echo HCA8587705_V1_MR HCA8587705_V1_MR segmentHA_T2.sh HCA8587705_V1_MR /data/bswift-1/dcallow/aging/imaging/HCA8587705_V1_MR/unprocessed/TSE_HiResHp/HCA8587705_V1_MR_TSE_HiResHp.nii.gz highres 1 #-------------------------------------------- #@# Hippocampal Subfields processing (T1+T2) left Fri May 28 12:05:35 EDT 2021

---

Setting up environment variables

INFO: error loading libraries in default configuration, trying with MCR libraries only LD_LIBRARY_PATH is .:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//runtime/glnxa64:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//bin/glnxa64:/data/bswif$Registering norm.mgz to additional volume No more processes. ERROR: could not open /data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/tmp/hippoSF_T1T2_v21_highres_left/41244773_norm__502687.mgh for reading ERROR: loading /data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/tmp/hippoSF_T1T2_v21_highres_left/41244773_norm__502687.mgh as MGH Warning: File '/data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/tmp/hippoSF_T1T2_v21_highres_left/41244773_norm__502687.mgh' not found. [^H> In myMRIread at 64 In segmentSubjectT1T2_autoEstimateAlveusML at 186]^H Attempt to reference field of non-structure array.

Error in segmentSubjectT1T2_autoEstimateAlveusML (line 188) MATLAB:nonStrucReference @#@FSTIME 2021:05:28:12:05:35 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 e 7.49 S 0.61 U 6.79 P 98% M 283156 F 0 R 84320 W 0 c 2392 w 9596 I 0 O 85080 L 5$@#@FSLOADPOST 2021:05:28:12:05:42 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 60.45 53.15 38.08 Linux compute-4-33.bswift.umd.edu http://secure-web.cisco.com/1sqdwOUu2B9k20N1ZAF2G3AjMOwj2lJePh4GNFQiYhImRJsLReMbcU3SXEBp36HD81jqxGdU8a11rJylMhtgbY4fajAEU2pMYsr0DVpWBlkaOMa76fsceUrIl9aQQGsiXc4t6jAY6yGgeO2kzpjftDgTb1eWEbDGuGccb2HunIGkKRrj0yIIhMCUBXNMsPGxCpYhRthsOcBxVagqqmQZxB5PmjkPPc4BKyyMN_eLiZEjt4ui6aNQG76WiX_3leabsXT0Dc4AQ7eKoT8OWNqqHcQ/http%3A%2F%2Fcompute-4-33.bswift.umd.edu 2.6.32-754.30.2.el6.x86_64 #1 SMP Fri May 29 04:45:43 EDT 2020 x86_64 x86_64 x86_64 GNU/Linux

T2 hippocampal subfields exited with ERRORS at Fri May 28 12:05:42 EDT 2021

For more details, see the log file /data/bswift-1/dcallow/aging/freesurfer/HCA8587705_V1_MR/scripts/hippocampal-subfields-T2.highres.log

Any ideas what might be causing this error. Again, it seems to be working for a small subset of participants however, the majority are failing with this error. *Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park dcallow@umd.edu dcallow@gmail.com 443-254-6298

On Fri, May 28, 2021 at 9:32 AM Iglesias Gonzalez, Juan E. < JIGLESIASGONZALEZ@mgh.harvard.edu> wrote:

Dear Daniel,

...

Are the T2s and T1s roughly aligned in RAS (physical coordinates)? In other words: do they (roughly) overlap when you open them together in Freeview?

Cheers,

/E

...

Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT)

*MailScanner has detected a possible fraud attempt from

...

"secure-web.cisco.com" claiming to be* http://secure-web.cisco.com/1XIQD_seUELoMBl32vITG_77ibtO3YwKokZL9vz-PcxXYRKf... http://secure-web.cisco.com/1M43tYnBIwe0As03lwnAGcBzSZfvIXhP_UsjatHKyZUaaQ4wSAHDh_rwH1615JlqcHfPYywTwRzVbI_to9hVZq--leXJy2p4Zrh_mUI3lNII4SXa870Dh3HPFfDvztZQqR8Lzb5jZgrooucfAyVmWEBNMCuB8-mMhkfQpliBwpQ4AlrLgpwXKROaATxslozZ45t7me-SsaBv2pGfPGHhefMDQiyWYTTwRkiWX5UsaBqKv7GznpWuae2cijb7yGp0Ot534fYLsrPfsPuzrmK7NMQ/http%3A%2F%2Fwww.jeiglesias.com

On May 28, 2021, at 07:53, Daniel Davidson Callow dcallow@umd.edu wrote:

    External Email - Use Caution

Hello,

I am running into errors when running

segmentHA_T2.sh ${subj} /data/bswift-1/dcallow/aging/freesurfer/${subj}/mri/T2.norm.mgz T2 1

Approximately 10% of my subjects are being processed but for some reason, the majority fail to execute. Here is an output from the error log.

---

USER dcallow HOST compute-4-32.bswift.umd.edu http://secure-web.cisco.com/1ypL43FxiKSZvppDyGttq1kG6jN0GRt9e8cgB2S5Z-8zCzVaVM-bCkayzZxY9xDU_KpcZcFWAPDqh90GDmfaCegId3XT6PKwKdcFIZXP27qvAGlubWjMrtSWPUClEYijiXXbemw4pG8RKDOZj6DPjOltVe5yMFHmf90ukT3OUKeqf7sTx70vaHCRaffDJe-yRzF5oO2Dnqy3JYjPkwjI1FW999MJQXWT6pjT1rnDxOkwbjKhl9FNrKXzV8OI9YJB12uI0m5B759UFLn4F9vrPog/http%3A%2F%2Fcompute-4-32.bswift.umd.edu PROCESSID 4033 PROCESSOR x86_64 OS Linux Linux compute-4-32.bswift.umd.edu http://secure-web.cisco.com/1ypL43FxiKSZvppDyGttq1kG6jN0GRt9e8cgB2S5Z-8zCzVaVM-bCkayzZxY9xDU_KpcZcFWAPDqh90GDmfaCegId3XT6PKwKdcFIZXP27qvAGlubWjMrtSWPUClEYijiXXbemw4pG8RKDOZj6DPjOltVe5yMFHmf90ukT3OUKeqf7sTx70vaHCRaffDJe-yRzF5oO2Dnqy3JYjPkwjI1FW999MJQXWT6pjT1rnDxOkwbjKhl9FNrKXzV8OI9YJB12uI0m5B759UFLn4F9vrPog/http%3A%2F%2Fcompute-4-32.bswift.umd.edu 2.6.32-754.35.1.el6.x86_64

#1 SMP Wed Sep 16 06:48:01 EDT 2020 x86_64 x86_64 x86_64 GNU/Linux

#-------------------------------------------- #@# Hippocampal Subfields processing (T1+T2) left Thu May 27 21:39:51 EDT 2021

---

Setting up environment variables

INFO: error loading libraries in default configuration, trying with MCR libraries only LD_LIBRARY_PATH is .:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//runtime/glnxa64:/data/bswift-0/software/freesurfer/7.1.0-1//MCRv84//bin/glnxa64:/data/bswift-0$Registering norm.mgz to additional volume makeIsotropic WARNING: not different enough, won't reslice! No more processes. ERROR: could not open /data/bswift-1/dcallow/aging/freesurfer/HCA8537992_V1_MR/tmp/hippoSF_T1T2_v21_T2_left/23207174_T2resampledLikeT1__353506.mgh for reading ERROR: loading /data/bswift-1/dcallow/aging/freesurfer/HCA8537992_V1_MR/tmp/hippoSF_T1T2_v21_T2_left/23207174_T2resampledLikeT1__353506.mgh as MGH Warning: File '/data/bswift-1/dcallow/aging/freesurfer/HCA8537992_V1_MR/tmp/hippoSF_T1T2_v21_T2_left/23207174_T2resampledLikeT1__353506.mgh' not found. [^H> In myMRIread at 64 In segmentSubjectT1T2_autoEstimateAlveusML at 207]^H Attempt to reference field of non-structure array.

Error in segmentSubjectT1T2_autoEstimateAlveusML (line 211)

MATLAB:nonStrucReference @#@FSTIME 2021:05:27:21:39:51 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 e 334.41 S 1.15 U 8.61 P 2% M 818424 F 0 R 185834 W 0 c 2541 w 20306 I 0 O 216480 L $@#@FSLOADPOST 2021:05:27:21:45:25 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 17 31.22 29.74 28.95 Linux compute-4-32.bswift.umd.edu http://secure-web.cisco.com/1ypL43FxiKSZvppDyGttq1kG6jN0GRt9e8cgB2S5Z-8zCzVaVM-bCkayzZxY9xDU_KpcZcFWAPDqh90GDmfaCegId3XT6PKwKdcFIZXP27qvAGlubWjMrtSWPUClEYijiXXbemw4pG8RKDOZj6DPjOltVe5yMFHmf90ukT3OUKeqf7sTx70vaHCRaffDJe-yRzF5oO2Dnqy3JYjPkwjI1FW999MJQXWT6pjT1rnDxOkwbjKhl9FNrKXzV8OI9YJB12uI0m5B759UFLn4F9vrPog/http%3A%2F%2Fcompute-4-32.bswift.umd.edu 2.6.32-754.35.1.el6.x86_64 #1 SMP Wed Sep 16 06:48:01 EDT 2020 x86_64 x86_64 x86_64 GNU/Linux

T2 hippocampal subfields exited with ERRORS at Thu May 27 21:45:25 EDT 2021

I am also getting a matlab_crash_dump file

---

   Segmentation violation detected at Thu May 27 21:51:52 2021

---

Configuration: Crash Decoding : Disabled Current Visual : None Default Encoding : US-ASCII GNU C Library : 2.12 stable MATLAB Architecture: glnxa64 MATLAB Root : /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux http://secure-web.cisco.com/1zf_ot3cQGUvMhTgphfJ7towMivhNxWKqA3AayyU_OPHHiMasb-EvBGTFN3sYYJDfq2OTyGKzBZ_szFAJCXZHlZGEtJjl-Jdhb4Q1bIAonDtiewkPoyMXUpsAcQaKfsBE0RsmUc-YGdemu96LMj476x2UIb3GfDNjDVx7ULnA6ydsfS5RHTfxedRiKFt6oLIZ-8AmzrNc44dziwIEz2Tm1zVXkZba_ISfg8fwql2KxoL8WGjCE7_3XIDrEbE-HNmMPhnNu3asRalw0_AJ6BOTkA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux MATLAB Version : 8.4.0.150421 (R2014b) Operating System : Linux 2.6.32-754.30.2.el6.x86_64 #1 SMP Fri May 29 04:45:43 EDT 2020 x86_64 Processor ID : x86 Family 6 Model 62 Stepping 4, GenuineIntel Software OpenGL : 0 Virtual Machine : Java 1.7.0_11-b21 with Oracle Corporation Java HotSpot(TM) 64-Bit Server VM mixed mode Window System : No active display

Fault Count: 1

Abnormal termination: Segmentation violation

Stack Trace (from fault): [ 0] 0x00007f2b30f06213 /lib64/libpthread.so.0+00033299 pthread_join+00000035 [ 1] 0x00007f2a9f4d847d /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 2] 0x00007f2a9f4d8cac /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 3] 0x00007f2a9f5cae63 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 4] 0x00007f2a9f5af896 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 5] 0x00007f2a9f5a6b8d /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 6] 0x00007f2a9f5a6fd0 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 7] 0x00007f2a9f5aad00 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 8] 0x00007f2a9f5a5c3c /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 9] 0x00007f2a9f44fb03 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 10] 0x00007f2a9f42b9cc /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 11] 0x00007f2a9f42b132 /tmp/MCR_1785852174/.mcrCache8.4/segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2.terrier/bin/kvlGEMSMatlab.mexa64+0$[ 12] 0x00007f2b21dcfc0a /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmex.so+00150538 http://secure-web.cisco.com/15wmunFtJy8RzDq9oVQoOhvMj4SqFWIMICnRxUk7kN3uyYtej40W1KAf2FgN8p-YHhCe94AM96CLuzs2_pg0h5a-wPhOcAbQDBbn9UroNugqM9zMNW_x85lUFfPpgR5eVTK_sVWwcg4CiDnJkgZm34QYRBZBTcAYN9riNJ9m1rpj4PKAxhbRXEmUfM_1qcroQ-tCUoHaYthJ1wh2oe_rXJu65oN57rZkO5uN2D-kO6NX50rAL6N-yYqFbQTvlWSoqZXcpaDvh0nH11oRbZSCgYQ/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmex.so%2B00150538 mexRunMexFile+00000090 [ 13] 0x00007f2b21dcc5c4 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmex.so+00136644 http://secure-web.cisco.com/1VNIP2TP7g_-k-V3EXmoqH3gSLCQPAVKDrJmmFHk4DSCIs8dpaPhlMZY3o1R2Gcl45b59huNzCHAuDXy3Jk_DTzSHWeoAdTGEyyL_kxblZnIJkrmRuC21lPT3uRUUA5F-hhCNI4L1ewaawelx52Ns4n9o9ra_oWhRf9AD84pTyjJnXGVX1FrlCKhr8xCI3BxucHGenwthYaUBlmin56HnLgin-otSEMgaMDZVIlfwdsJjpm_sB9ATY4IgK9GI4jaKI7g9MMLbHjEVqHgacPW6sw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmex.so%2B00136644 [ 14] 0x00007f2b21dcd414 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmex.so+00140308 http://secure-web.cisco.com/1DHyyF-k0XGkPk9gRiFdvyrzyhAwZmrJ8Vpas5l1bhBSmDpXf1DE5cQ_3mHR9xgFvggvUyK6nS-KPKUap_Y3PtkQxvO-b174nhgWgkAkhqF0GCz9M2ffTgT-YPppDR2yc8dr-rFkMth1BYS8tXsV0l1UcZ8aP_QkA_xu_XEQ-IULq2naXsfdbIOmnONEUC_6gpFEpp2_EkJr0prYDw63-Fcx2DNkGKP9H_lYz9w8au_3bwu-8Upbm2dSza-8ykxGxxKbsp1J3VugjWqfirkKTxg/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmex.so%2B00140308 [ 15] 0x00007f2b232ff329 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_dispatcher.so+00791337 http://secure-web.cisco.com/1YvAiBC_3G9VAawE4steKXeCaNTlrpgMnQG_qhwLeycblS635IsShf_UEZVAtvWU98ic7nFoyTObuenzWyfIOrdZ1ukAI2_Rwpr7BFODPD8xr8FVnAIglj8lndurD-18acdOLCAx9cl__2Xe2_21LZQn4auLKXubsYP6cvn7ODCEtX6tup_3H0vUFEZ4WQGRknJISa7pBZBc8A0cMb8ooCFDVafzDFjkSj4EiKd-9hl01YeUQPAu5Hwt6s7FUSKNmxksu_SyBfaeCpYE8OvqpHA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_dispatcher.so%2B00791337 _ZN8Mfh_file11dispatch_fhEiPP11mxArray$[ 16] 0x00007f2b2260fb70 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04053872 http://secure-web.cisco.com/1FqlnK1mbYe0fc4WrLh27McIgFcpF4caZpprfvWHGIiLLoxXo6_L3M8BINfHY5-jSh1ngRLTREAlaV-ecKWLXgaZmAvPaE1WcZ3K8NB0Vvxh-3_asNJndl8j3D5yqTCWCZygCAlsQE2BScTJzzzgOg0nDdICKmBjoe5NmIpTDU8e12QBMlVY4gLY59bk2WU5NEVeEhnmukrN_bzXIchegVXLsx6fumnKQzIoSHTfUwa7LAM4D8pzDWBH7hsRyezlzADNhYYUpmOqNOqn5JFOEDA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04053872 [ 17] 0x00007f2b225bfe02 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03726850 http://secure-web.cisco.com/1oFCMQbMq8_LNNSwavId3uL9KorlKBV-Dq9AH2k9--Ptuwe56v1f0M8oNm9UBgRvAQacl9RKg1Qg0DY7ko-IcvfQe-2sfN0qRBoXdPr8AINOFM5HQFjasYlRzdVlc-G_JqKNPbJEzsVRjfXLn9CA4BIE2htjH6A3_wsQTimZoAzJF_HNTmhJ7qA5E1fFaDN7kOubeJKvBSvnuTwu-bMBUREZA03ALLxwcXdU7Zf9awXp32KrUJr3sssPhgqjOZm0-uLmk2eWzYlnYg6SD7XCpag/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03726850 [ 18] 0x00007f2b225c2022 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03735586 http://secure-web.cisco.com/1mkHocgN-E2JcT6SI0pNs-oXMVy5k5oGB6gATPm9NI82pijbaPsiS_mVu6yD_8ldltWLoJH4dyPp4vYVPvfXnMD03lmxENx9NH-5f5d00CK147UzH945ZVfrdnKRmxtQZPQAbtHNrwjMC7s4lNIqHSR7GSaetK6V29YMKzu_-Tu1SwwBDg3JePYZjvodQRdYUkHEfs8YmahPAtNRQPM3MskmCOUcjL4tV6sdY1yfjwhrpmPrjlQKVXgKZQMDqosdS_VLmyb6B_maYrhrDgnW0aA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03735586 [ 19] 0x00007f2b225c7f87 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03760007 http://secure-web.cisco.com/1IXEh5f9oNhkKzllddjiYB3PrZZ0_a0EZYlGzFTPY7IyKerNHNEwXaFMOYZXMm4hct0Rom3hL_ou_TGy8UJSc7P-OrfKK0CrXSeDSR-7YEwoHUr9hq-a_cceHo-B4JS3oLxWaU0ykCPBleBOrFVoTgQHmHnKJTjxDY5GAIqCi48jEIy7iuEXH8AMIgvxL5dbjDgjN_qtXvhWG70-bIbaIS0j25znSUF0ho6j9W7Q-okSGwCZJ0YkWBJerVuCH5b3o_Rr2u-KSeDxXNKED0dtlBw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03760007 [ 20] 0x00007f2b225c36ff /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03741439 http://secure-web.cisco.com/1z7kRHrPDXQ2J89IxYNotG6f3AWl-VlFzlspUBbkrsL1gDgJbVg7Jvui01VXzy_9XgOLBM7uiNrNy2emqwnaZRVr97UmD81gSG0_F-eUpsqBkSrR3o5bOkcSlKSKbnIJLwrb7IlUi1lGu-eqqDsDfvtd8bmEZ9LWhsNqU63v-ByjHg8-Tppp8IHXCegbHJwtiYG5b7ldmmACZL3zXlOMT5m_Xf7vUxnL9hQ9AOVduNe9rwSJml83zaACIYRO7148iHaaWASzcChMIFktUQdn6DA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03741439 [ 21] 0x00007f2b225c4334 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03744564 http://secure-web.cisco.com/1Qidv5KKgCpV0A4yNcjeOaCG5BbPEneNCG_VGPSEeihppLC0K8VCKQKqgycrF_JG7hDWxESiIkJ0zZSKIoEcr9MBBq-zCjGrXAT3o-uxNgPfkPx2Diq5rB4I4Nj_5SOHSz67iis8FUiswPfla7T1ax5dsZbZqWNZzf3mRlN9H7qfLp7x9gNQlbo1DsK8hFvHTUGz_PM_4onSpO9CffOK0BfVEfeOpXOHy6EjznUeUWhuJyx6dorWoftGwaDXEKw44ZGcYPHdtnJXKpRfHp8TKpw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03744564 [ 22] 0x00007f2b2263952e /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04224302 http://secure-web.cisco.com/1LFwdsCWta1IKYv3k3YydtSX7z6ZkdwRsguf-SFigI8Kxt4X2FK9QjJHavPcu2kTMH1M8_iHldk2sCDW-6Cw6fokp46WGvsOCfyh25z_jqednT1Bw_Rij1zigZ9QCabcdCHHrRmXYLySPYEVnuaTn22efOadhUo6Nk4TlR0yJ9IkLdzQFrQh_3bCoEoX8T_dZVAmOpLbfqeCTnXHh06TvfZx3I9xWFZvsuURivUTNG_DPyZpHm1y05pMXl4mY_b6ff5sdtFbOIGeh7kop0ZDDEw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04224302 [ 23] 0x00007f2b232ff329 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_dispatcher.so+00791337 http://secure-web.cisco.com/1YvAiBC_3G9VAawE4steKXeCaNTlrpgMnQG_qhwLeycblS635IsShf_UEZVAtvWU98ic7nFoyTObuenzWyfIOrdZ1ukAI2_Rwpr7BFODPD8xr8FVnAIglj8lndurD-18acdOLCAx9cl__2Xe2_21LZQn4auLKXubsYP6cvn7ODCEtX6tup_3H0vUFEZ4WQGRknJISa7pBZBc8A0cMb8ooCFDVafzDFjkSj4EiKd-9hl01YeUQPAu5Hwt6s7FUSKNmxksu_SyBfaeCpYE8OvqpHA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_dispatcher.so%2B00791337 _ZN8Mfh_file11dispatch_fhEiPP11mxArray$[ 24] 0x00007f2b2260fb70 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04053872 http://secure-web.cisco.com/1FqlnK1mbYe0fc4WrLh27McIgFcpF4caZpprfvWHGIiLLoxXo6_L3M8BINfHY5-jSh1ngRLTREAlaV-ecKWLXgaZmAvPaE1WcZ3K8NB0Vvxh-3_asNJndl8j3D5yqTCWCZygCAlsQE2BScTJzzzgOg0nDdICKmBjoe5NmIpTDU8e12QBMlVY4gLY59bk2WU5NEVeEhnmukrN_bzXIchegVXLsx6fumnKQzIoSHTfUwa7LAM4D8pzDWBH7hsRyezlzADNhYYUpmOqNOqn5JFOEDA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04053872 [ 25] 0x00007f2b225bfe02 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03726850 http://secure-web.cisco.com/1oFCMQbMq8_LNNSwavId3uL9KorlKBV-Dq9AH2k9--Ptuwe56v1f0M8oNm9UBgRvAQacl9RKg1Qg0DY7ko-IcvfQe-2sfN0qRBoXdPr8AINOFM5HQFjasYlRzdVlc-G_JqKNPbJEzsVRjfXLn9CA4BIE2htjH6A3_wsQTimZoAzJF_HNTmhJ7qA5E1fFaDN7kOubeJKvBSvnuTwu-bMBUREZA03ALLxwcXdU7Zf9awXp32KrUJr3sssPhgqjOZm0-uLmk2eWzYlnYg6SD7XCpag/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03726850 [ 26] 0x00007f2b225c2022 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03735586 http://secure-web.cisco.com/1mkHocgN-E2JcT6SI0pNs-oXMVy5k5oGB6gATPm9NI82pijbaPsiS_mVu6yD_8ldltWLoJH4dyPp4vYVPvfXnMD03lmxENx9NH-5f5d00CK147UzH945ZVfrdnKRmxtQZPQAbtHNrwjMC7s4lNIqHSR7GSaetK6V29YMKzu_-Tu1SwwBDg3JePYZjvodQRdYUkHEfs8YmahPAtNRQPM3MskmCOUcjL4tV6sdY1yfjwhrpmPrjlQKVXgKZQMDqosdS_VLmyb6B_maYrhrDgnW0aA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03735586 [ 27] 0x00007f2b225c7f87 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03760007 http://secure-web.cisco.com/1IXEh5f9oNhkKzllddjiYB3PrZZ0_a0EZYlGzFTPY7IyKerNHNEwXaFMOYZXMm4hct0Rom3hL_ou_TGy8UJSc7P-OrfKK0CrXSeDSR-7YEwoHUr9hq-a_cceHo-B4JS3oLxWaU0ykCPBleBOrFVoTgQHmHnKJTjxDY5GAIqCi48jEIy7iuEXH8AMIgvxL5dbjDgjN_qtXvhWG70-bIbaIS0j25znSUF0ho6j9W7Q-okSGwCZJ0YkWBJerVuCH5b3o_Rr2u-KSeDxXNKED0dtlBw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03760007 [ 28] 0x00007f2b225c36ff /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03741439 http://secure-web.cisco.com/1z7kRHrPDXQ2J89IxYNotG6f3AWl-VlFzlspUBbkrsL1gDgJbVg7Jvui01VXzy_9XgOLBM7uiNrNy2emqwnaZRVr97UmD81gSG0_F-eUpsqBkSrR3o5bOkcSlKSKbnIJLwrb7IlUi1lGu-eqqDsDfvtd8bmEZ9LWhsNqU63v-ByjHg8-Tppp8IHXCegbHJwtiYG5b7ldmmACZL3zXlOMT5m_Xf7vUxnL9hQ9AOVduNe9rwSJml83zaACIYRO7148iHaaWASzcChMIFktUQdn6DA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03741439 [ 29] 0x00007f2b225c4334 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03744564 http://secure-web.cisco.com/1Qidv5KKgCpV0A4yNcjeOaCG5BbPEneNCG_VGPSEeihppLC0K8VCKQKqgycrF_JG7hDWxESiIkJ0zZSKIoEcr9MBBq-zCjGrXAT3o-uxNgPfkPx2Diq5rB4I4Nj_5SOHSz67iis8FUiswPfla7T1ax5dsZbZqWNZzf3mRlN9H7qfLp7x9gNQlbo1DsK8hFvHTUGz_PM_4onSpO9CffOK0BfVEfeOpXOHy6EjznUeUWhuJyx6dorWoftGwaDXEKw44ZGcYPHdtnJXKpRfHp8TKpw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03744564 [ 30] 0x00007f2b2263952e /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+04224302 http://secure-web.cisco.com/1LFwdsCWta1IKYv3k3YydtSX7z6ZkdwRsguf-SFigI8Kxt4X2FK9QjJHavPcu2kTMH1M8_iHldk2sCDW-6Cw6fokp46WGvsOCfyh25z_jqednT1Bw_Rij1zigZ9QCabcdCHHrRmXYLySPYEVnuaTn22efOadhUo6Nk4TlR0yJ9IkLdzQFrQh_3bCoEoX8T_dZVAmOpLbfqeCTnXHh06TvfZx3I9xWFZvsuURivUTNG_DPyZpHm1y05pMXl4mY_b6ff5sdtFbOIGeh7kop0ZDDEw/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B04224302 [ 31] 0x00007f2b232ff329 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_dispatcher.so+00791337 http://secure-web.cisco.com/1YvAiBC_3G9VAawE4steKXeCaNTlrpgMnQG_qhwLeycblS635IsShf_UEZVAtvWU98ic7nFoyTObuenzWyfIOrdZ1ukAI2_Rwpr7BFODPD8xr8FVnAIglj8lndurD-18acdOLCAx9cl__2Xe2_21LZQn4auLKXubsYP6cvn7ODCEtX6tup_3H0vUFEZ4WQGRknJISa7pBZBc8A0cMb8ooCFDVafzDFjkSj4EiKd-9hl01YeUQPAu5Hwt6s7FUSKNmxksu_SyBfaeCpYE8OvqpHA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_dispatcher.so%2B00791337 _ZN8Mfh_file11dispatch_fhEiPP11mxArray$[ 32] 0x00007f2b225ecbf0 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03910640 http://secure-web.cisco.com/1XY2HS1eoFmCZj_0FLnEggB0qkNY41bJhNhIxrQkYQlfUUFOeH7A1s1kvm8DQWM0JlgCJOvl0vJiumfWqWZpNqcPopcWLIVMrGP89FTG4LxSpueiRrp0XpSeQ-vDq_Gp62up2g5nwwIVcmd7-oGNZmWQzFkkViXG0-KZbB3pU0t5L9QDBRtqK8nLjqVkLlKjqncDvdWTxmejTP9mpEj20zQuBbn_-88xbgdpbszqvtvKEThIjeHxG57d1SeK3JuQLoJ9FFtxjVfLmaIa15EmzgQ/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03910640 [ 33] 0x00007f2b225ec449 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03908681 http://secure-web.cisco.com/15RN_eXEIUAO_WqqYNIIAMljnNJvT34HmTcfAnwdPgjQ5Zs_ljlxOt3x13LTRvM7d5IunUlOUz5aKZ7GubCOSwKdOyfM_N8vvu2s8rcvMi_VSMoOHrf9PjqE-VmSGbzKW0i_9a6AXA6ZDjAeKelV7RTipDEECT6fzvwMMYPf94nguZ7fEEF4bMoM2nZHkvhvuZGI_ZTO8PGtiq5ntFL907fj7pH9SWOuz8Nk9t5X7rPPQ0ntQShuBYa89QKVU2cfmhQRoAogbmYs22gLetkR8ZQ/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03908681 [ 34] 0x00007f2b2252ffd6 /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03137494 http://secure-web.cisco.com/1XibXIDoYPELJ8Qmp8ylDzLuf8aUubO7-jyooiQCEf8a082UlM2DJiqW5LaFdKT1yQJbxTKlXm1N_dBVMT-orB0SEIbRxWaLJDGWLozzZ8D-UhNRaYXYgWHAzjvA6draUI0HwfhbOmcDglBW0Q06X4mOA2cCvheWHU-rDg5mA3PdplDBSiG6JmbgZg-feiB947xEiq2BUD8ZrJe9j8XTPhjYBed6n1I_4WbG9tNT1YNCCpzNtFjBtVwnO-NTCN4QbXB2UmoKnv8og7_XILbQrEg/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03137494 inCallFcnWithTrap+00000086 [ 35] 0x00007f2b225b3c0b /export/rel60_shadow/ glue.umd.edu/software/matlab/2014b/Linux/bin/glnxa64/libmwm_interpreter.so+03677195 http://secure-web.cisco.com/1IAIH2i6-h19TW-GQXcC6sE7doC05sQYZagDqPgNU7ylypApwktFIOYKOoaKDLZKVt6j1FAmWztWJ2TpLtqqgQ_JPtZUaeDVOLW6CQR7hI9SuV0fizRPOBwBdGUHvBvKq2W35Tmj27nCuylilBfvIx_fAJmYZvwD8WFgDdLEl4sZmL812gt0QLdUyaJa5Av3bXoLMpCjFcB1nM8CY9SVYRn98cmJyTHQ5hRsVF0m8j3uzDgGf6cW5wRbtzDfQ2RQG8zgWtA8CAoUH_oMeziILfA/http%3A%2F%2Fglue.umd.edu%2Fsoftware%2Fmatlab%2F2014b%2FLinux%2Fbin%2Fglnxa64%2Flibmwm_interpreter.so%2B03677195

This error was detected while a MEX-file was running. If the MEX-file is not an official MathWorks function, please examine its source code for errors. Please consult the External Interfaces Guide for information on debugging MEX-files.

If this problem is reproducible, please submit a Service Request via: *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* http://secure-web.cisco.com/1rdnPKCDuyhiu30H52s9OAw_MLOLTJaFfywoYqY9AKfmYbrc... http://secure-web.cisco.com/1B8en4WQVOmBM-TonUpSzamw674QdqjI_ltVT2KdTcbPbuPW0K3Ay8KDhD5c4RCuwKYVmR07FjU0Aevx09ahCMeyv0JkXQ52Hmhwb4sx7s4JboH2NUrlUAj_t1NiR1NWXsdcBbrW2ARL_QZIvDtzEvCZllOY4TGkavTAZNKXychD1QqvsZFE-MKZXZcrP5pagoPPejJGw9gWjGYxJHuPexjzzMvAZ00KWwGungv_lBCKCFbVfyIShsbLN-xOO4h3eWRUjCNBh0HGJu8phyXt6Xg/http%3A%2F%2Fwww.mathworks.com%2Fsupport%2Fcontact_us%2F

A technical support engineer might contact you with further information.

Any insight or help you can provide is greatly appreciated. *Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park dcallow@umd.edu dcallow@gmail.com 443-254-6298

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Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://secure-web.cisco.com/1RGSnHGed1XqM0RkhyPBHHITWtu_lHqadhPUwOiojpwsq5S... https://secure-web.cisco.com/1jsYurSjDkGLI1-FXY0m-g6eynNSH2B64GSTOT1rHMjSjL7kIkfgKV2zmlJPeBvA-TEVNAom0uKRZNC6T9sZBy14KcgdYWMVG7kY74X1XiBBJsat99Dd13x0rDvSPQ_ZsHdqjh5k7NEgH53EIs3OyAPn3u1TEOQiO9Jc1HlBv8y_Xv-Fw4rjHlXw5_LtjitzefDiVcas7hloDVAV6zNI93mxW9z-Kp8TebW8Mv_BjZtcCRAvCi0yWr_6yADWQB6IwNjyBDeNCbzrmb8_Q0XVVFQ/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer

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Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://secure-web.cisco.com/1RGSnHGed1XqM0RkhyPBHHITWtu_lHqadhPUwOiojpwsq5S... https://secure-web.cisco.com/1jsYurSjDkGLI1-FXY0m-g6eynNSH2B64GSTOT1rHMjSjL7kIkfgKV2zmlJPeBvA-TEVNAom0uKRZNC6T9sZBy14KcgdYWMVG7kY74X1XiBBJsat99Dd13x0rDvSPQ_ZsHdqjh5k7NEgH53EIs3OyAPn3u1TEOQiO9Jc1HlBv8y_Xv-Fw4rjHlXw5_LtjitzefDiVcas7hloDVAV6zNI93mxW9z-Kp8TebW8Mv_BjZtcCRAvCi0yWr_6yADWQB6IwNjyBDeNCbzrmb8_Q0XVVFQ/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* http://secure-web.cisco.com/1UQ1Y9yewaFDq047VMbNCsHFEPFAxKXRHEkfpe5unW_Uyexp... http://secure-web.cisco.com/1ycFdJ3HBtw3uEtRBrGQmpsaI7h3Q04wUG7MkDXiuLGLW3PcBt3bF-ZrY_si9Y3NUuOIRTFw1cU2Ihn2mDhRD8kEQgb6TbEGa6224kBcO6bW4mFnkyoJ6bD8Nxc1nqWhL7571ICwUQdOH15K1AdRbbkPkqtfaHy5bUrNzlAsZwH0SpvxuQ-lX3l1IJHQmhwDTVlAjdH6JDjq9Jpfbft51-Y8cE5UCkdmTTtrK2vyjHYtNUFdDHB-h6BLf1pLocfBOgrgqJFeHAP4VSZNni2g_Ug/http%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.

-- *Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park dcallow@umd.edu dcallow@gmail.com 443-254-6298

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Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1RGSnHGed1XqM0RkhyPBHHITWtu_lHqadhPUwOiojpwsq5S...

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Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1RGSnHGed1XqM0RkhyPBHHITWtu_lHqadhPUwOiojpwsq5S... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at http://secure-web.cisco.com/1UQ1Y9yewaFDq047VMbNCsHFEPFAxKXRHEkfpe5unW_Uyexp... . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.