External Email - Use Caution
Hi experts,
As stated in the subject, how to convert "nopvc.nii.gz" generated by "mri_gtmpvc" to a format like "gtm.stats.dat"? Moreover, how to consolidate all "gtm.stats.dat"'s PVC uptake values of ROIs from different subjects in one spreadsheet? Is there any existing command to do that?
Thanks, Angel
External Email - Use Caution
Any idea?
Angel Wong, PhD Scientific Officer Hong Kong Center for Neurodegenerative Diseases (HKCeND)
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of WONG Wan Wa angelwong@ust.hk Sent: Thursday, August 15, 2024 12:13 PM To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] PetSurfer: how to convert nopvc.nii.gz to a format like gtm.stats.dat?
External Email - Use Caution
Hi experts,
As stated in the subject, how to convert "nopvc.nii.gz" generated by "mri_gtmpvc" to a format like "gtm.stats.dat"? Moreover, how to consolidate all "gtm.stats.dat"'s PVC uptake values of ROIs from different subjects in one spreadsheet? Is there any existing command to do that?
Thanks, Angel
You can run something like mri_convert nopvc.nii.gz --ascii nopvc.dat This will give you a text file To put a bunch together across subject, you can run something like mri_concat */nopvc.nii.gz --o all.nopvc.nii.gz Then do the same trick as above.
On 8/20/2024 12:01 AM, WONG Wan Wa wrote:
External Email - Use Caution
Any idea?
*Angel Wong, PhD* Scientific Officer Hong Kong Center for Neurodegenerative Diseases (HKCeND)
*From:* freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of WONG Wan Wa angelwong@ust.hk *Sent:* Thursday, August 15, 2024 12:13 PM *To:* freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu *Subject:* [Freesurfer] PetSurfer: how to convert nopvc.nii.gz to a format like gtm.stats.dat?
External Email - Use Caution
Hi experts,
As stated in the subject, how to convert "nopvc.nii.gz" generated by "mri_gtmpvc" to a format like "gtm.stats.dat"? Moreover, how to consolidate all "gtm.stats.dat"'s PVC uptake values of ROIs from different subjects in one spreadsheet? Is there any existing command to do that?
Thanks, Angel
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