what does the recon-all.log say? Did the recon finish correctly? Does this happen if you just run it on the command line? Bruce

On Sat, 13 Mar 2010, Xue, Feng wrote:

Dear Bruce & FS experts,

Please forgive my re-post, for I havn't got any response from last post. I do appreciate if anyone could give me a hint or suggestion.

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We are running freesurfer with Sun GridEngine. Currently, we repeatedly got this error in SGE's job error log file on some data when doing recon_all:

$ cat recon_xf.e437 (standard_in) 2: Error: comparison in expression $ cat recon_xf.e431 (standard_in) 2: comparison in expression

I also checked the recon-all-status.log file, but not error was found.

Has anyone met this problem? Is it critical? Thanks in advance.

-- Best Regards

Xue, Feng Phd. candidate Major in Developmental Cognitive Neuroscience

National Key Laboratory of Cognitive Neuroscience and Learning Beijing Normal University Beijing, China. 100875 Tel: +86-13810154455 web: http://psychbrain.bnu.edu.cn ============================================== Welcome to MuDuo JinSheng BBS @ Beijing Normal University telnet://bbs.mdjs.org http://bbs.mdjs.org _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer