Hello,

Two options I can think of--develop your own atlas (time consuming), or apply the Lausanne atlas parcellation, and combine the smaller ROIs to get the ones you want.

See this thread:

https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2016-February/043869....

https://github.com/mattcieslak/easy_lausanne

Anthony

On 1/18/17 4:57 PM, Aya Kabbara wrote:

Thank you..

Actually, I realized that using tksurfer I can do a manual parcellation. However, I need an automatic parcellation. Is there a way?

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