Dear FreeSurfer Experts,
Is there a way to use command line to obtain the stats (e.g., area) for a given label?
Thanks! Daniel
-- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454
Dear all,
I wanted to add that I would to obtain the stats associated with fsaverage.
When I used mris_anatomical_stats on fsaverage, it gave me a warning message: could not read fsaverage/mri/wm.mgz
Thanks! Daniel
-- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454
On 9/23/13 3:40 PM, "Yang, Daniel" <yung-jui.yang@yale.edumailto:yung-jui.yang@yale.edu> wrote:
Dear FreeSurfer Experts,
Is there a way to use command line to obtain the stats (e.g., area) for a given label?
Thanks! Daniel
-- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454
Hi Daniel
you can give it to mris_anatomical_stats with the -l <label> command
cheers Bruce On Mon, 23 Sep 2013, Yang, Daniel wrote:
Dear FreeSurfer Experts,
Is there a way to use command line to obtain the stats (e.g., area) for a given label?
Thanks! Daniel -- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454
Hi Bruce,
I am sorry. I wasn't clear.. I wanted to obtain the label stats associated with fsaverage.
I also just read this earlier message: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg10441.html
Are things different now -- is there an easy way to obtain fsaverage's stats with the standard labels? They will serve as a relative basis for comparison only.
Thanks! Daniel
-- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454
On 9/23/13 4:37 PM, "Bruce Fischl" <fischl@nmr.mgh.harvard.edumailto:fischl@nmr.mgh.harvard.edu> wrote:
Hi Daniel
you can give it to mris_anatomical_stats with the -l <label> command
cheers Bruce On Mon, 23 Sep 2013, Yang, Daniel wrote:
Dear FreeSurfer Experts, Is there a way to use command line to obtain the stats (e.g., area) for a given label? Thanks! Daniel
-- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454
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