Hello Freesurfer experts, Does anyone have experience running freesurfer on a mac, pointing to images stored on Google Drive? Due to space issues on disk, I was trying to take that approach, but when I run recon-all pointing to the image stack, I get errors - and it says "For more details, see the log file". Where is the log file stored that I can look at?
Sorry - newbie questions...
Ankita
Hi Ankita
if you can't fit the input image then you definitely won't be able to fit the output of recon-all. In general if the input is unix-readable then you should be ok
cheers Bruce
On Thu, 21 Jan 2016, Arindam Chatterjee wrote:
Hello Freesurfer experts,Does anyone have experience running freesurfer on a mac, pointing to images stored on Google Drive? Due to space issues on disk, I was trying to take that approach, but when I run recon-all pointing to the image stack, I get errors - and it says "For more details, see the log file". Where is the log file stored that I can look at?
Sorry - newbie questions...
Ankita
Thank you Bruce! How much total space is needed per study?
Ankita
On Thu, Jan 21, 2016 at 9:15 AM Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
Hi Ankita
if you can't fit the input image then you definitely won't be able to fit the output of recon-all. In general if the input is unix-readable then you should be ok
cheers Bruce
On Thu, 21 Jan 2016, Arindam Chatterjee wrote:
Hello Freesurfer experts,Does anyone have experience running freesurfer
on a
mac, pointing to images stored on Google Drive? Due to space issues on
disk,
I was trying to take that approach, but when I run recon-all pointing to
the
image stack, I get errors - and it says "For more details, see the log file". Where is the log file stored that I can look at?
Sorry - newbie questions...
Ankita
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About 400MB
On 01/21/2016 12:18 PM, Arindam Chatterjee wrote:
Thank you Bruce! How much total space is needed per study?
Ankita
On Thu, Jan 21, 2016 at 9:15 AM Bruce Fischl <fischl@nmr.mgh.harvard.edu mailto:fischl@nmr.mgh.harvard.edu> wrote:
Hi Ankita if you can't fit the input image then you definitely won't be able to fit the output of recon-all. In general if the input is unix-readable then you should be ok cheers Bruce On Thu, 21 Jan 2016, Arindam Chatterjee wrote: > Hello Freesurfer experts,Does anyone have experience running freesurfer on a > mac, pointing to images stored on Google Drive? Due to space issues on disk, > I was trying to take that approach, but when I run recon-all pointing to the > image stack, I get errors - and it says "For more details, see the log > file". Where is the log file stored that I can look at? > > Sorry - newbie questions... > > Ankita > >_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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Thank you!
Ankita
On Thu, Jan 21, 2016 at 9:41 AM Douglas N Greve greve@nmr.mgh.harvard.edu wrote:
About 400MB
On 01/21/2016 12:18 PM, Arindam Chatterjee wrote:
Thank you Bruce! How much total space is needed per study?
Ankita
On Thu, Jan 21, 2016 at 9:15 AM Bruce Fischl <fischl@nmr.mgh.harvard.edu mailto:fischl@nmr.mgh.harvard.edu> wrote:
Hi Ankita if you can't fit the input image then you definitely won't be able to fit the output of recon-all. In general if the input is unix-readablethen
you should be ok cheers Bruce On Thu, 21 Jan 2016, Arindam Chatterjee wrote: > Hello Freesurfer experts,Does anyone have experience running freesurfer on a > mac, pointing to images stored on Google Drive? Due to space issues on disk, > I was trying to take that approach, but when I run recon-all pointing to the > image stack, I get errors - and it says "For more details, see the log > file". Where is the log file stored that I can look at? > > Sorry - newbie questions... > > Ankita > >_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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