Hi Carolina:
And did you tested the tksurfer command ?...
for example: tksurfer CORBIC_vol01 rh pial
Sincerely,
Gonzalo Rojas Costa Department of Radiology Clinica Las Condes Santiago Chile
Message: 4 Date: Sun, 18 Sep 2011 10:25:26 -0400 (EDT) From: Bruce Fischl fischl@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] tkmedit bus error To: Carolina Valencia cvalencia@linkdx.com.co Cc: Freesurfer Mailing List freesurfer@nmr.mgh.harvard.edu
Hi Carolina,
does this happen every time? Can you run freeview on the volumes and see if it can display them properly?
cheers Bruce On Thu, 15 Sep 2011, Carolina Valencia wrote:
Hi FSusers
I run recon-all in a patient without problems, but when I tried to view it in tkmedit, an error pops up.
I appreciate your help!
Best regards, Carolina
recon-all -s CORBIC_vol01 finished without error at Tue Sep 13 12:42:43 COT 2011 done cvalencia-Precision-WorkStation-T3400:~> tkmedit CORBIC_vol01 brainmask.mgz -aux T1.mgz -surfs -segmentation aseg.mgz $FREESURFER_HOME/FreeSurferColorLUT.txt Bus error cvalencia-Precision-WorkStation-T3400:~> tkmedit CORBIC_vol01 brainmask.mgz -aux T1.mgz -surfs -segmentation aseg.mgz $FREESURFER_HOME/FreeSurferColorLUT.txt Bus error
Thanks for the answers. I think the problem was the hard disk space, I can open it now in the views (tksurfer, tkmedit)
Best regards,
Carolina
2011/9/18 Gonzalo Rojas Costa gonzalo.rojas.costa@gmail.com
Hi Carolina:
And did you tested the tksurfer command ?...
for example: tksurfer CORBIC_vol01 rh pial
Sincerely,
Gonzalo Rojas Costa Department of Radiology Clinica Las Condes Santiago Chile
Message: 4 Date: Sun, 18 Sep 2011 10:25:26 -0400 (EDT) From: Bruce Fischl fischl@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] tkmedit bus error To: Carolina Valencia cvalencia@linkdx.com.co Cc: Freesurfer Mailing List freesurfer@nmr.mgh.harvard.edu
Hi Carolina,
does this happen every time? Can you run freeview on the volumes and see if it can display them properly?
cheers Bruce On Thu, 15 Sep 2011, Carolina Valencia wrote:
Hi FSusers
I run recon-all in a patient without problems, but when I tried to view
it in tkmedit, an error pops up.
I appreciate your help!
Best regards, Carolina
recon-all -s CORBIC_vol01 finished without error at Tue Sep 13 12:42:43
COT 2011
done cvalencia-Precision-WorkStation-T3400:~> tkmedit CORBIC_vol01
brainmask.mgz -aux T1.mgz -surfs -segmentation aseg.mgz
$FREESURFER_HOME/FreeSurferColorLUT.txt Bus error cvalencia-Precision-WorkStation-T3400:~> tkmedit CORBIC_vol01
brainmask.mgz -aux T1.mgz -surfs -segmentation aseg.mgz
$FREESURFER_HOME/FreeSurferColorLUT.txt Bus error
Hi Carolina:
Is it possible, but in my case when the hard disk is full at the moment of the processing, I got a fatal error from recon-all command...
Sincerely,
Gonzalo Rojas Costa
El 19-09-2011 9:53, Carolina Valencia escribió:
Thanks for the answers. I think the problem was the hard disk space, I can open it now in the views (tksurfer, tkmedit)
Best regards,
Carolina
freesurfer@nmr.mgh.harvard.edu