Hi Abel,

no, there's no automated tool for this without special purpose acquistions. You'll need to edit the brainmask.mgz to remove the dura that the pial surface is grabbing.

sorry :<

Bruce On Thu, 13 Dec 2007, abel cruz vadell wrote:

Hi everyone

Checking the automatic pial segmentation of my MRI images in Freesurfer, I found some pixels misclassified as pial surface and I'm afraid of wrong cortical thickness measures in those regions. Is there any automatic tool to correct it? I attached two images with arrows signalizing the problem.

Thanks for your help

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