Dear Freesurfer experts,
I try run this code according to Xhemi: mris_apply_reg --src-label label/rh.V1_exvivo.thresh.label --trg rh-on-lh.V1_exvivo.thresh.label \ --streg xhemi/surf/lh.fsaverage_sym.sphere.reg surf/lh.fsaverage_sym.sphere.reg
However, error shows: Option --src-label unknown. And also mris_apply_reg --help didn't show how to correctly use -label.
What's the correctly code.
Thanks for your advices.
Best,
Lanbo
Hi Lanbo
Doug (who knows the answer to this question) is on vacation. Can you repost next week?
thanks Bruce On Fri, 3 Nov 2017, lanbo Wang wrote:
Dear Freesurfer experts, I try run this code according to Xhemi: mris_apply_reg --src-label label/rh.V1_exvivo.thresh.label --trg rh-on-lh.V1_exvivo.thresh.label \ --streg xhemi/surf/lh.fsaverage_sym.sphere.reg surf/lh.fsaverage_sym.sphere.reg
However, error shows: Option --src-label unknown. And also mris_apply_reg --help didn't show how to correctly use -label.
What's the correctly code.
Thanks for your advices.
Best,
Lanbo
Hi Lanbo, You need Freesurfer 6 to run this command. The flag --src-label is not part of FS5.3
Best, M_
From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of lanbo Wang Sent: Friday, November 3, 2017 11:49 AM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] mris_apply_reg
Dear Freesurfer experts,
I try run this code according to Xhemi: mris_apply_reg --src-label label/rh.V1_exvivo.thresh.label --trg rh-on-lh.V1_exvivo.thresh.label \
--streg xhemi/surf/lh.fsaverage_sym.sphere.reg surf/lh.fsaverage_sym.sphere.reg
However, error shows: Option --src-label unknown. And also mris_apply_reg --help didn't show how to correctly use -label.
What's the correctly code.
Thanks for your advices.
Best,
Lanbo
Dear Mohamad,
You're right, after I use version 6.0, it works. Thanks for your help.
best, Lanbo
On Fri, Nov 3, 2017 at 3:12 PM, Alshikho, Mohamad J. < MALSHIKHO@mgh.harvard.edu> wrote:
Hi Lanbo,
You need Freesurfer 6 to run this command. The flag --src-label is not part of FS5.3
Best,
M_
*From:* freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@ nmr.mgh.harvard.edu] *On Behalf Of *lanbo Wang *Sent:* Friday, November 3, 2017 11:49 AM *To:* freesurfer@nmr.mgh.harvard.edu *Subject:* [Freesurfer] mris_apply_reg
Dear Freesurfer experts,
I try run this code according to Xhemi: mris_apply_reg --src-label label/rh.V1_exvivo.thresh.label --trg rh-on-lh.V1_exvivo.thresh.label \
--streg xhemi/surf/lh.fsaverage_sym.sphere.reg surf/lh.fsaverage_sym.sphere.reg
However, error shows: Option --src-label unknown. And also mris_apply_reg --help didn't show how to correctly use -label.
What's the correctly code.
Thanks for your advices.
Best,
Lanbo
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