Hi Shahab,

this should be in the wiki too. If you have your SUBJECTS_DIR set properly, you can display the segmentation via:

tkmedit $subject norm.mgz -segmentation mri/aseg.mgz $FREESURFER_HOME/FreeSurferColorLUT.txt

cheers, Bruce

On Sun, 19 Mar 2006, Shahabuddin Ansari wrote:

Hello,

Thanks for answering my previous querry. I have successfully segmented the subcortical regions of the brain. Now, my next simple question is how to display each segmented object separately? I think it is to do with masking, but not sure how to apply that in 3D.

Thanks Shahab

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