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Hello Freesurfer Team

I am trying to segment the macaque brain. After skull strip, control point adding and white matter editing, I try to inflate the brain surface.

My command is :recon-all -s monkey2 -autorecon2-wm -noaseg -cc-crs 100 85 112 -pons-crs 99 105 80

The output error is:

#@# WhitePreAparc lh 2020年 10月 05日 星期一 13:23:44 CST

cd /usr/local/freesurfer/subjects/monkey2/mri mris_place_surface --adgws-in ../surf/autodet.gw.stats.lh.dat --wm wm.mgz --invol brain.finalsurfs.mgz --lh --i ../surf/lh.orig --o ../surf/lh.white.preaparc --white --nsmooth 5 7.1.0 7.1.0

cd /usr/local/freesurfer/subjects/monkey2/mri setenv SUBJECTS_DIR /usr/local/freesurfer/subjects mris_place_surface --adgws-in ../surf/autodet.gw.stats.lh.dat --wm wm.mgz --invol brain.finalsurfs.mgz --lh --i ../surf/lh.orig --o ../surf/lh.white.preaparc --white --nsmooth 5

Reading in input surface ../surf/lh.orig Smoothing surface with 5 iterations Area 230166 0.28728 0.06614 0.000899 0.5852 Corner 690498 60.00000 9.22592 3.263084 157.1301 Edge 345249 0.81774 0.11586 0.028436 1.5900 Hinge 345249 4.79409 6.13323 0.000002 153.5438 Not reading in aparc Reading in input volume brain.finalsurfs.mgz Reading in wm volume wm.mgz MRIclipBrightWM(): nthresh=30761, wmmin=5, clip=110 MRIfindBrightNonWM(): 6937 bright non-wm voxels segmented. Masking bright non-wm for white surface MRImask(): AllowDiffGeom = 1 MRImask(): AllowDiffGeom = 1 Ripping frozen voxels ERROR: need seg for ripping Command exited with non-zero status 1 @#@FSTIME 2020:10:05:13:23:44 mris_place_surface N 14 e 12.39 S 0.16 U 10.80 P 88% M 434260 F 25 R 126035 W 0 c 3134 w 27 I 5168 O 0 L 1.41 1.59 1.40 @#@FSLOADPOST 2020:10:05:13:23:56 mris_place_surface N 14 1.32 1.56 1.39

Linux zhao-VirtualBox 4.15.0-118-generic #119-Ubuntu SMP Tue Sep 8 12:30:01 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux

Can you help me explain above error and how to solve this problem?

I have attached the wm.mgz,but recon-all.log and brainmask.mgz are beyond the size limit . Thanks in advance!

All best,

Jie