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Yes, WUSTL format. I saw some ifh files in the average directory of freesurfer (at least the version I downloaded) so I thought there was maybe a way to view or convert those types of files. On Mon, Aug 10, 2020 at 12:01 PM freesurfer-request@nmr.mgh.harvard.edu wrote:
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Today's Topics:
- Re: img (with ifh header) to mgz (Douglas N. Greve)
Message: 1 Date: Mon, 10 Aug 2020 11:33:54 -0400 From: "Douglas N. Greve" dgreve@mgh.harvard.edu Subject: Re: [Freesurfer] img (with ifh header) to mgz To: freesurfer@nmr.mgh.harvard.edu Message-ID: 472e39b7-8a08-f585-8d52-0c748e792395@mgh.harvard.edu Content-Type: text/plain; charset="utf-8"
what is ifh? Interfile? I don't know how to convert ifh
On 8/10/2020 10:57 AM, Ana Navarro Cebrian wrote:
????????External Email - Use Caution
Hi all,
How can I view an .img or convert it to .mgz? I've used .img files with freesurfer, but their headers had a .hdr extension. In this case, the header has an .ifh extension and I'm not able to view the image in freesurfer.
Thanks!
-- *Ana Navarro-Cebrian, PhD.* Assistant Research Scientist Psychological and Brain Sciences Department Johns Hopkins University
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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I have no personal experience with the format, but out of curiosity I googled it and it seems this website lists tools to convert .ifh to various formats, including NIFTI:
https://4dfp.readthedocs.io/en/latest/tools/interconvert-formats.html
Apparently you can also create an Analyze 7.5 header from the ifh header. Maybe it helps.
Tim
On August 10, 2020 at 6:41 PM Ana Navarro Cebrian anavarrocebrian@gmail.com wrote:
External Email - Use CautionYes, WUSTL format. I saw some ifh files in the average directory of freesurfer (at least the version I downloaded) so I thought there was maybe a way to view or convert those types of files. On Mon, Aug 10, 2020 at 12:01 PM freesurfer-request@nmr.mgh.harvard.edu wrote:
Send Freesurfer mailing list submissions to freesurfer@nmr.mgh.harvard.edu
To subscribe or unsubscribe via the World Wide Web, visit https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer or, via email, send a message with subject or body 'help' to freesurfer-request@nmr.mgh.harvard.edu
You can reach the person managing the list at freesurfer-owner@nmr.mgh.harvard.edu
When replying, please edit your Subject line so it is more specific than "Re: Contents of Freesurfer digest..."
Today's Topics:
- Re: img (with ifh header) to mgz (Douglas N. Greve)
Message: 1 Date: Mon, 10 Aug 2020 11:33:54 -0400 From: "Douglas N. Greve" dgreve@mgh.harvard.edu Subject: Re: [Freesurfer] img (with ifh header) to mgz To: freesurfer@nmr.mgh.harvard.edu Message-ID: 472e39b7-8a08-f585-8d52-0c748e792395@mgh.harvard.edu Content-Type: text/plain; charset="utf-8"
what is ifh? Interfile? I don't know how to convert ifh
On 8/10/2020 10:57 AM, Ana Navarro Cebrian wrote:
????????External Email - Use Caution
Hi all,
How can I view an .img or convert it to .mgz? I've used .img files with freesurfer, but their headers had a .hdr extension. In this case, the header has an .ifh extension and I'm not able to view the image in freesurfer.
Thanks!
-- *Ana Navarro-Cebrian, PhD.* Assistant Research Scientist Psychological and Brain Sciences Department Johns Hopkins University
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
-
Ana Navarro Cebrian -
Tim Schäfer