Doug, I tried mri_vol2vol --mov .../orig/001.mgz --targ ...orig/001.mgz --regheader -o ... This created a volume but the same issue remained. When I load a segmentation on top of the created volume, tkmedit won't let me alter the segmentation. If I use "new segmentation" as opposed to loading a previous segmentation (e.g. the aseg.mgz volume) then the segmentation works fine. Anyway, what I would like to do is put a volume as similar to the original dicoms as possible upon which a manual segmentation can be performed in tkmedit. Any other thoughts? Jared
Sorry, add --inv to the cmd line
Jared Price wrote:
Doug, I tried mri_vol2vol --mov .../orig/001.mgz --targ ...orig/001.mgz --regheader -o ... This created a volume but the same issue remained. When I load a segmentation on top of the created volume, tkmedit won't let me alter the segmentation. If I use "new segmentation" as opposed to loading a previous segmentation (e.g. the aseg.mgz volume) then the segmentation works fine. Anyway, what I would like to do is put a volume as similar to the original dicoms as possible upon which a manual segmentation can be performed in tkmedit. Any other thoughts? Jared
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Douglas N Greve -
Jared Price