Hi,all: As we have too many controls and patients to run the "recon-all",and it is really time-suming,so,how can I reduce the time of recon-all in a group of patients? After read the statistic info on the website https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllRunTimes It seems the mac pro will take much more time than others,so ,can anybody give me a suggestion?Is itMac Pro with 12 cores works? http://www.apple.com/macpro/
Thanks a lot!
Wang
You can run 12 recon-all in parallel.
You'll have 12 patients processed in each day approximately
--------------------------------------------------------------------- Pedro Paulo de Magalhães Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom -- www.netfilter.com.br -- For mobile: http://www.netfilter.com.br/mobile
2011/3/10 汪贵宏 wgh0805@126.com
Hi,all: As we have too many controls and patients to run the "recon-all",and it is really time-suming,so,how can I reduce the time of recon-all in a group of patients? After read the statistic info on the website https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllRunTimes It seems the mac pro will take much more time than others,so ,can anybody give me a suggestion?Is it Mac Pro http://www.apple.com/macpro/ with 12 cores works? http://www.apple.com/macpro/
Thanks a lot!
Wang
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If you have enough memory! Maybe Richard can post current CPU recon times with the latest hardware and optimizations. I think they are much shorter than they used to be
On Mar 10, 2011, at 3:28 AM, Pedro Paulo de Magalhães Oliveira Juniorppj@netfilter.com.br wrote:
You can run 12 recon-all in parallel.
You'll have 12 patients processed in each day approximately
Pedro Paulo de Magalhães Oliveira Junior Diretor de Operações Netfilter & SpeedComm Telecom -- www.netfilter.com.br -- For mobile: http://www.netfilter.com.br/mobile
2011/3/10 汪贵宏 wgh0805@126.com Hi,all: As we have too many controls and patients to run the "recon-all",and it is really time-suming,so,how can I reduce the time of recon-all in a group of patients? After read the statistic info on the website https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllRunTimes It seems the mac pro will take much more time than others,so ,can anybody give me a suggestion?Is it Mac Pro with 12 cores works? http://www.apple.com/macpro/
Thanks a lot!
Wang
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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On Thu, 2011-03-10 at 08:27 -0500, Bruce Fischl wrote:
If you have enough memory! Maybe Richard can post current CPU recon times with the latest hardware and optimizations. I think they are much shorter than they used to be
My workstation (3.2 GHz Nehalem) can do a recon-all ernie in about 8 hours. Running four in parallel (one for each core) bumps the total walltime up to about eight and a half hours.
Regards,
Richard
That's without GPU?
On Thu, Mar 10, 2011 at 11:17, Richard G. Edgar rge21@nmr.mgh.harvard.eduwrote:
On Thu, 2011-03-10 at 08:27 -0500, Bruce Fischl wrote:
If you have enough memory! Maybe Richard can post current CPU recon times with the latest hardware and optimizations. I think they are much shorter than they used to be
My workstation (3.2 GHz Nehalem) can do a recon-all ernie in about 8 hours. Running four in parallel (one for each core) bumps the total walltime up to about eight and a half hours.
Regards,
Richard
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu
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Bruce Fischl -
Pedro Paulo de Magalhães Oliveira Junior -
Richard G. Edgar -
汪贵宏