Thanks Doug,

That is what I needed to know!

Brad

On Jun 26, 2014, at 11:13 AM, Douglas N Greve greve@nmr.mgh.harvard.edu wrote:

It is helpful to have a command line, but I think I can figure it out from what you have written. The first row is everything outside your seg. The second is everything inside your seg. doug

On 06/25/2014 05:54 PM, Martins, Brad wrote:

...

Hi everyone,

I’m new to Freesurfer and I have a question about the output of mri_segstats. I have created an ROI in which I am measuring cortical thickness. When I run mri_segstats I get a table with 2 rows of segmentation values. What are the 2 rows? The SegId of the two rows are 0 and 1 but I don’t know what segmentations that corresponds to or where to find out. Any help would be greatly appreciated!

Thanks,

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