sorry, Substancia Nigra is also on our list of next structures to be released, but it is not ready yet
cheers Bruce
On Sat, 31 Aug 2019, Gwang-Won Kim wrote:
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Hi there,
I would like to make a ROI for a left Substanci Nigra.
It is possible to make the ROIs for thalamus, putamen, caudate, etc.
But, it is not possible to make the left Substanci Nigra ROI as follows: mri_binarize --i $SUBJECTS_DIR/$subj/mri/aparc+aseg.mgz --match 27 --o $SUBJECTS_DIR/L_substancia.nii.gz
How do I make the ROI for the left Substanci Nigra? [?usn=6394937&email=kw0212@nate.com&key=0bf5f9144afd3f5339286a1489f485ed$7b4 8f2ae@mail3.nate.com]
freesurfer@nmr.mgh.harvard.edu