Hello,
I'm having a problem to use MRI_defacing (default radius 7), which stripped off some frontal areas as well. Does anyone have any similar problems/solutions?
I've increased the radius up to 14, which seems reducing the stripping areas, but still remained this stripping problem within the cortex.
Best wishes,
Sujin
Research fellow, Sujin Hong NRlabs Neuropolitics Research School of Social and Political Science The University of Edinburgh Room 2.03 18 Buccleuch Place Edinburgh EH8 9LN
Tel: +44 131 650 6632tel:%2B44%20131%20650%206632 sujin.hong@ed.ac.ukmailto:sujin.hong@ed.ac.uk
&
Edinburgh Imaging The University of Edinburgh Room GU426D Chancellor's Building 49 Little France Crescnet Edinburgh EH16 4SB
The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.
YOu could try increasing the density of the search (which will slow it down considerably). Maybe -s 7? It's hard to diagnose without looking at your data, so feel free to upload it if this fails and also send us the exact command line you ran
On Mon, 20 Jun 2016, HONG Sujin wrote:
Hello,
I'm having a problem to use MRI_defacing (default radius 7), which stripped off some frontal areas as well. Does anyone have any similar problems/solutions?
I've increased the radius up to 14, which seems reducing the stripping areas, but still remained this stripping problem within the cortex.
Best wishes,
Sujin
Research fellow, Sujin Hong NRlabs Neuropolitics Research School of Social and Political Science The University of Edinburgh Room 2.03 18 Buccleuch Place Edinburgh EH8 9LN Tel: +44 131 650 6632 sujin.hong@ed.ac.uk
&
Edinburgh Imaging The University of Edinburgh Room GU426D Chancellor's Building 49 Little France Crescnet Edinburgh EH16 4SB
freesurfer@nmr.mgh.harvard.edu