I don't know. It looks like FS was installed twice into two separate directories. I assume from the names that they are both verrion 6, but I can't say for sure.

On 05/02/2018 03:39 PM, Hurtado, Aura Maria wrote:

Hi all,

I’m digging into data that was reconned a while ago. I see in the recon-all.done files and some say:

CMDPATH /usr/local/freesurfer/stable6/bin/recon-all

and others say:

CMDPATH /usr/local/freesurfer/stable6_0_0/bin/recon-all

Is there a difference between the recon-all commands in the stable 6 and the stable6_0_0 freesurfer folders?

Thanks,

Aura M.

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