It is possible to visualize topological defects in tksurfer by loading the curvature from surf/?h.defect_labels. Is there any way to visualize these defects in tkmedit? I am having trouble seeing how the defects are related to wm.mgz, etc., in tksurfer, and it would be very helpful if there were a way to see the defects in tkmedit.
Try using the defect-seg script. It will create labels and segmentations of defects that you can visualize. Run it with --help to see how to run it and call tkmedit and tksurfer to visualize the defects. doug
On 10/18/2012 10:41 AM, Benjamin Kay wrote:
It is possible to visualize topological defects in tksurfer by loading the curvature from surf/?h.defect_labels. Is there any way to visualize these defects in tkmedit? I am having trouble seeing how the defects are related to wm.mgz, etc., in tksurfer, and it would be very helpful if there were a way to see the defects in tkmedit. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Benjamin Kay -
Douglas N Greve