problem with format of CT dicoms

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Borzello, Mia

22 Aug 2014 22 Aug '14

12:17 p.m.

Hi Freesurfers,

I'm in the process of creating the ct.mgz file, but it is erroring and saying there is a "segmentation fault (core dumped)."

What can I do to remedy this?

Thanks, m

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Douglas N Greve

22 Aug 22 Aug

12:31 p.m.

Hi Mia, do you realize that your description of the problem is too vague for us to help you? If you want help in a timely fashion, please include more detail like the problem you ran, the command-line arguments, the terminal output, etc. Please see the following web page for the types information we are looking for:

surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

The easier you make it for us, the more likely you are to get help.

thanks doug

On 08/22/2014 12:17 PM, Borzello, Mia wrote:

...

Hi Freesurfers,

I'm in the process of creating the ct.mgz file, but it is erroring and saying there is a "segmentation fault (core dumped)."

What can I do to remedy this?

Thanks, m

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

Borzello, Mia

12:37 p.m.

Right, sorry. I was running a command with mri_convert in order to convert the ct dicoms to mgz format. The error I ran into was: UseSliceScaleFactor 0 (slice 0: 1) Segmentation fault (core dumped)

Thanks, m ________________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu [freesurfer-bounces@nmr.mgh.harvard.edu] on behalf of Douglas N Greve [greve@nmr.mgh.harvard.edu] Sent: Friday, August 22, 2014 12:31 PM To: Freesurfer support list Subject: Re: [Freesurfer] problem with format of CT dicoms

surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

The easier you make it for us, the more likely you are to get help.

thanks doug

On 08/22/2014 12:17 PM, Borzello, Mia wrote:

...

Hi Freesurfers,

I'm in the process of creating the ct.mgz file, but it is erroring and saying there is a "segmentation fault (core dumped)."

What can I do to remedy this?

Thanks, m

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Douglas N Greve

12:43 p.m.

Hi Mia, please follow the instructions on the web site below for submitting bug reports. thanks doug

On 08/22/2014 12:37 PM, Borzello, Mia wrote:

...

Right, sorry. I was running a command with mri_convert in order to convert the ct dicoms to mgz format. The error I ran into was: UseSliceScaleFactor 0 (slice 0: 1) Segmentation fault (core dumped)

Thanks, m ________________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu [freesurfer-bounces@nmr.mgh.harvard.edu] on behalf of Douglas N Greve [greve@nmr.mgh.harvard.edu] Sent: Friday, August 22, 2014 12:31 PM To: Freesurfer support list Subject: Re: [Freesurfer] problem with format of CT dicoms

Hi Mia, do you realize that your description of the problem is too vague for us to help you? If you want help in a timely fashion, please include more detail like the problem you ran, the command-line arguments, the terminal output, etc. Please see the following web page for the types information we are looking for:

surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

The easier you make it for us, the more likely you are to get help.

thanks doug

On 08/22/2014 12:17 PM, Borzello, Mia wrote:

...
Hi Freesurfers,

I'm in the process of creating the ct.mgz file, but it is erroring and saying there is a "segmentation fault (core dumped)."

What can I do to remedy this?

Thanks, m

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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Borzello, Mia
Douglas N Greve