Hi,
I was wondering if this method is still applicable in version 6 https://surfer.nmr.mgh.harvard.edu/fswiki/CreatingROIs
I cannot seem to find any of the options for creating an ROI.
Thank you,
S
I think it should work; We are not using tksurfer any more (freeview instead), but I think it should still work
On 02/23/2018 05:16 PM, Sarah Cole wrote:
Hi,
I was wondering if this method is still applicable in version 6 https://surfer.nmr.mgh.harvard.edu/fswiki/CreatingROIs
I cannot seem to find any of the options for creating an ROI.
Thank you,
S
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
It doesn't work on tksurfer. But it's ok.
So Doug, is this the latest tutorial: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultiModalFmriIndividua... for FS-FAST and creating functional ROI?
More specifically, do I need to use "mri_vol2surf" to get the activation on the surface?
This was not in the other tutorial: http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastFirstLevel
Thanks
On Mon, Feb 26, 2018 at 3:28 PM, Douglas N Greve greve@nmr.mgh.harvard.edu wrote:
I think it should work; We are not using tksurfer any more (freeview instead), but I think it should still work
On 02/23/2018 05:16 PM, Sarah Cole wrote:
Hi,
I was wondering if this method is still applicable in version 6 https://surfer.nmr.mgh.harvard.edu/fswiki/CreatingROIs
I cannot seem to find any of the options for creating an ROI.
Thank you,
S
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
I apologize. I was wrong.
Thanks, S
On Mon, Feb 26, 2018 at 5:16 PM, Sarah Cole coleashley00@gmail.com wrote:
It doesn't work on tksurfer. But it's ok.
So Doug, is this the latest tutorial: https://surfer.nmr.mgh. harvard.edu/fswiki/FsTutorial/MultiModalFmriIndividual_freeview for FS-FAST and creating functional ROI?
More specifically, do I need to use "mri_vol2surf" to get the activation on the surface?
This was not in the other tutorial: http://surfer.nmr.mgh.harvard. edu/fswiki/FsFastTutorialV6.0/FsFastFirstLevel
Thanks
On Mon, Feb 26, 2018 at 3:28 PM, Douglas N Greve < greve@nmr.mgh.harvard.edu> wrote:
I think it should work; We are not using tksurfer any more (freeview instead), but I think it should still work
On 02/23/2018 05:16 PM, Sarah Cole wrote:
Hi,
I was wondering if this method is still applicable in version 6 https://surfer.nmr.mgh.harvard.edu/fswiki/CreatingROIs
I cannot seem to find any of the options for creating an ROI.
Thank you,
S
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
I'm not sure what you are trying to do. The 2nd tutorial below is for FSFAST which is a comprehensive fMRI analysis package in which mri_vol2surf is built-in. The 1st tutorial is if you were using some other fMRI package and you wanted to interface with FreeSurfer.
On 02/26/2018 06:16 PM, Sarah Cole wrote:
It doesn't work on tksurfer. But it's ok.
So Doug, is this the latest tutorial: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultiModalFmriIndividua... for FS-FAST and creating functional ROI?
More specifically, do I need to use "mri_vol2surf" to get the activation on the surface? This was not in the other tutorial: http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV6.0/FsFastFirstLevel
Thanks
On Mon, Feb 26, 2018 at 3:28 PM, Douglas N Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu> wrote:
I think it should work; We are not using tksurfer any more (freeview instead), but I think it should still work On 02/23/2018 05:16 PM, Sarah Cole wrote: > Hi, > > I was wondering if this method is still applicable in version 6 > https://surfer.nmr.mgh.harvard.edu/fswiki/CreatingROIs <https://surfer.nmr.mgh.harvard.edu/fswiki/CreatingROIs> > > > I cannot seem to find any of the options for creating an ROI. > > Thank you, > > S > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> -- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu> Phone Number: 617-724-2358 <tel:617-724-2358> Fax: 617-726-7422 <tel:617-726-7422> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 <https://gate.nmr.mgh.harvard.edu/filedrop2> www.nmr.mgh.harvard.edu/facility/filedrop/index.html <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline <http://www.partners.org/complianceline> . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Sarah Cole