Hi Erik,

usually we parallelize the number of subjects, rather than the individual pipelines. That gives us the best performance.

Best, Martin

On Thu, 2018-12-06 at 11:07 +0000, Erik O'Hanlon wrote:

External Email - Use Caution         Hi FS experts,

I'm running a longitudinal process with three time points per subject and was wondering if you can advise on the typical time to process? Can the -parallel flag be added to the base and long steps? I'm running this on a cluster that has 16 core nodes with 32gigs of ram so it might give me a good tme saving if these steps can be parallelized.

Thanks and regards

Erik

Postdoctoral Research Fellow  Dept. Of Psychiatry Royal College of Surgeons in Ireland ERC Building Beaumont Hospital Dublin & Dept. Of Psychiatry Trinity College Institute of Neuroscience The Llyod Institute  Trinity College Dublin D2

Erik O'Hanlon  Postdoctoral researcher

RCSI Psychiatry  Royal College of Surgeons in Ireland  Beaumont Road, Beaumont D9 Ireland T: 8093740  E: erikohanlon@rcsi.ie W: www.rcsi.com

Transforming Healthcare Education, Research and Service: RCSI Strategic Plan 2018-2022

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