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Dear all
I ran the hippocampal subfield analysis with this script: recon-all -s HP_0015 -hippocampal-subfields-T1, and this completed without errors. However, looking at outputs inside the mri directory, there is only the left hemisphere (3 of them) but no right hemisphere outputs.
Why did this occur and how can I correct it?
Any help would be most appreciated Best wishes Zola
Dr Zola Mannie BSc(Hons), MSc, PhD Senior Research Officer; CADE Clinic Department of Academic Psychiatry Royal North Shore Hospital St Leonards Sydney. NSW; 2065; Australia Tel: +61Tel:+61294629908 E: zola.mannie@sydney.edu.au
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Hi Zola, What version of FreeSurfer was this? Can you please send us the log? Cheers Eugenio
Sent from my phone, please excuse brevity and typos
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Zola Mannie zola.mannie@sydney.edu.au Sent: Thursday, May 3, 2018 4:52:24 AM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Hippocampal subfield analysis did not run or produce right hemisphere outpus
External Email - Use Caution
Dear all
I ran the hippocampal subfield analysis with this script: recon-all -s HP_0015 -hippocampal-subfields-T1, and this completed without errors. However, looking at outputs inside the mri directory, there is only the left hemisphere (3 of them) but no right hemisphere outputs.
Why did this occur and how can I correct it?
Any help would be most appreciated Best wishes Zola
Dr Zola Mannie BSc(Hons), MSc, PhD Senior Research Officer; CADE Clinic Department of Academic Psychiatry Royal North Shore Hospital St Leonards Sydney. NSW; 2065; Australia Tel: +61Tel:+61294629908 E: zola.mannie@sydney.edu.au
freesurfer@nmr.mgh.harvard.edu
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Iglesias Gonzalez, Eugenio -
Zola Mannie