Hello experts, I was running 10000 monte carlo simulation before my desktop automatically restarted, does anyone know a command to continue from where it stopped? The simulation for left hemisphere stopped at 9146/10000 and right hemisphere at 9125/10000. Thank you Paul
I would just use what was created. There is nothing magical about 10,000 iterations. A few iterations short won't make any difference.
On 09/28/2016 10:35 AM, miracle ozzoude wrote:
Hello experts, I was running 10000 monte carlo simulation before my desktop automatically restarted, does anyone know a command to continue from where it stopped? The simulation for left hemisphere stopped at 9146/10000 and right hemisphere at 9125/10000. Thank you Paul
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Thank you Doug Paul
On Wed, Sep 28, 2016 at 10:39 AM, Douglas N Greve <greve@nmr.mgh.harvard.edu
wrote:
I would just use what was created. There is nothing magical about 10,000 iterations. A few iterations short won't make any difference.
On 09/28/2016 10:35 AM, miracle ozzoude wrote:
Hello experts, I was running 10000 monte carlo simulation before my desktop automatically restarted, does anyone know a command to continue from where it stopped? The simulation for left hemisphere stopped at 9146/10000 and right hemisphere at 9125/10000. Thank you Paul
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-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
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Hello Doug, Do you know if there's any command to make it continue from where it stopped in case of future incidents? Also, what does " yoursubject" mean in this code? Can I substitute it with fsaverage? Thanks Paul
mri_mcsim --o $FREESURFER_HOME/average/mult-comp-cor/yoursubject/rh/cortex \ --base mc-z --surface yoursubject rh --nreps 10000
On Wed, Sep 28, 2016 at 10:39 AM, Douglas N Greve <greve@nmr.mgh.harvard.edu
wrote:
I would just use what was created. There is nothing magical about 10,000 iterations. A few iterations short won't make any difference.
On 09/28/2016 10:35 AM, miracle ozzoude wrote:
Hello experts, I was running 10000 monte carlo simulation before my desktop automatically restarted, does anyone know a command to continue from where it stopped? The simulation for left hemisphere stopped at 9146/10000 and right hemisphere at 9125/10000. Thank you Paul
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
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The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
There is no way. Yes, you can specify fsaverage for yoursubject
On 9/28/16 3:47 PM, miracle ozzoude wrote:
Hello Doug, Do you know if there's any command to make it continue from where it stopped in case of future incidents? Also, what does " yoursubject" mean in this code? Can I substitute it with fsaverage? Thanks Paul mri_mcsim --o $FREESURFER_HOME/average/mult-comp-cor/yoursubject/rh/cortex \ --base mc-z --surface yoursubject rh --nreps 10000
On Wed, Sep 28, 2016 at 10:39 AM, Douglas N Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu> wrote:
I would just use what was created. There is nothing magical about 10,000 iterations. A few iterations short won't make any difference. On 09/28/2016 10:35 AM, miracle ozzoude wrote: > Hello experts, > I was running 10000 monte carlo simulation before my desktop > automatically restarted, does anyone know a command to continue from > where it stopped? The simulation for left hemisphere stopped at > 9146/10000 and right hemisphere at 9125/10000. Thank you > Paul > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> -- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu> Phone Number: 617-724-2358 <tel:617-724-2358> Fax: 617-726-7422 <tel:617-726-7422> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 <https://gate.nmr.mgh.harvard.edu/filedrop2> www.nmr.mgh.harvard.edu/facility/filedrop/index.html <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline <http://www.partners.org/complianceline> . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thank you
On Wed, Sep 28, 2016 at 3:49 PM, Douglas Greve greve@nmr.mgh.harvard.edu wrote:
There is no way. Yes, you can specify fsaverage for yoursubject
On 9/28/16 3:47 PM, miracle ozzoude wrote:
Hello Doug, Do you know if there's any command to make it continue from where it stopped in case of future incidents? Also, what does " yoursubject" mean in this code? Can I substitute it with fsaverage? Thanks Paul
mri_mcsim --o $FREESURFER_HOME/average/mult-comp-cor/yoursubject/rh/cortex \ --base mc-z --surface yoursubject rh --nreps 10000
On Wed, Sep 28, 2016 at 10:39 AM, Douglas N Greve < greve@nmr.mgh.harvard.edu> wrote:
I would just use what was created. There is nothing magical about 10,000 iterations. A few iterations short won't make any difference.
On 09/28/2016 10:35 AM, miracle ozzoude wrote:
Hello experts, I was running 10000 monte carlo simulation before my desktop automatically restarted, does anyone know a command to continue from where it stopped? The simulation for left hemisphere stopped at 9146/10000 and right hemisphere at 9125/10000. Thank you Paul
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu
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Douglas N Greve
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miracle ozzoude