Those will have the vertex-wise p-values. You can read them in to matlab with the MRIread() command.

On 6/7/17 8:18 AM, Lim, Lena wrote:

Dear Doug,

Thanks very much for your reply.

Sorry, I couldn’t read the files—would they show the non-significant F and p values as I would find in the summary output if the results were significant? Please could you kindly help?

Many thanks again,

Lena

*From:*freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] *On Behalf Of *Douglas Greve *Sent:* 08 May 2017 16:03 *To:* freesurfer@nmr.mgh.harvard.edu *Subject:* Re: [Freesurfer] F and p- values for non sig findings

If you look in the output folder, there will be a subfolder for each contrast. In there there will be sig.mgh and F.mgh files

On 5/8/17 9:06 AM, Lim, Lena wrote:

Dear Freesurfer experts,

I tried to do a group x gender interaction in QDEC and there is no
sig interaction, but how do I get the F or T and P values please
as requested by the reviewers?

Many thanks,

Lena




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