Dear FreeSurfer community,
We have a cluster that we drew on the surface on the right hemisphere, and we’re interested in extracting cortical thickness values from the contralateral hemisphere.
Wondering if there’s a way to transform the dimensions of our cluster from the right hemisphere to the left-hemisphere?
Thank you so much for any help you may be able to provide.
Best regards,
Fred
If this is for an individual, then run it through the xhemi processing stream
https://surfer.nmr.mgh.harvard.edu/fswiki/Xhemi
There are examples there on mapping a label across hemis
On 02/15/2017 03:30 PM, Uquillas, Federico D'Oleire wrote:
Dear FreeSurfer community,
We have a cluster that we drew on the surface on the right hemisphere, and we’re interested in extracting cortical thickness values from the contralateral hemisphere.
Wondering if there’s a way to transform the dimensions of our cluster from the right hemisphere to the left-hemisphere?
Thank you so much for any help you may be able to provide.
Best regards,
Fred
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
It’s for a group, but I could say the fsaverage is for an individual. Will give xhemi a try.
Thank you so much Doug!
Best,
Fred
On 2/15/17, 6:11 PM, "freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Douglas N Greve" <freesurfer-bounces@nmr.mgh.harvard.edu on behalf of greve@nmr.mgh.harvard.edu> wrote:
If this is for an individual, then run it through the xhemi processing stream
https://surfer.nmr.mgh.harvard.edu/fswiki/Xhemi
There are examples there on mapping a label across hemis
On 02/15/2017 03:30 PM, Uquillas, Federico D'Oleire wrote:
Dear FreeSurfer community,
We have a cluster that we drew on the surface on the right hemisphere, and we’re interested in extracting cortical thickness values from the contralateral hemisphere.
Wondering if there’s a way to transform the dimensions of our cluster from the right hemisphere to the left-hemisphere?
Thank you so much for any help you may be able to provide.
Best regards,
Fred
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu