You can run mris_anatomical_stats on each subject, saving the result in the stats folder. Then run aparcstats2table specifying all your subjects and the new stats file. Run it with -h to get help

On 4/18/2020 5:19 PM, s7675854@stud.uni-frankfurt.de wrote:

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Dear Freesurfer experts,

I am trying to extract values within a ROI/label that I drew myself and registered to the subjects using mri_label2label.

• is there a way to use mri_anatomical_stats for multiple subjects, so

that the table output contains ROI information on all subjects and not only one (similar to e.g. aparcstats2table)?

• It seems like I could use this command to extract information on

e.g. thickness and surface area, but could I also use it for LGI data? (And if not, is there a different option for this measure?)

Thanks a lot, Doro

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