Hi,
I'm an undergraduate learning about/working with freesurfer as part of my summer research project. In early-mid June I downloaded the dev version of Freesurfer to use on my mac. When I ran it at that time, I had no problem. Recently I started working on a cluster computer (linux) and got the same problem outlined in this exchange:
https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg48412.html.https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg48412.html
I was wondering if I could get an update on this and possibly an explanation as to what the problem was. I was told that the dev version on the cluster was updated today (with the fixed version as mentioned in the email) but I still got that message after running the program.
Also, were there any major changes to the program that I should be aware about in terms affecting data analysis of the MRI patient data for the hippocampus subfields tool?
If you could let me know, it would be appreciated.
Thanks,
Daniel
Hi Daniel, the problems was that I accidentally compiled the module against dynamic rather than static libraries. The code will be fixed in the development version very soon. Also, I introduced some changes in the code so that it can handle high resolution T1s, but the behaviour on standard resolution T1 data hasn’t changed. I hope this helps. Cheers, Eugenio
Juan Eugenio Iglesias Translational Imaging Group University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/
On 27 Jul 2016, at 20:49, Liu, Daniel dliu@mcw.edu wrote:
Hi,
I'm an undergraduate learning about/working with freesurfer as part of my summer research project. In early-mid June I downloaded the dev version of Freesurfer to use on my mac. When I ran it at that time, I had no problem. Recently I started working on a cluster computer (linux) and got the same problem outlined in this exchange:
https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg48412.html.https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg48412.html
I was wondering if I could get an update on this and possibly an explanation as to what the problem was. I was told that the dev version on the cluster was updated today (with the fixed version as mentioned in the email) but I still got that message after running the program.
Also, were there any major changes to the program that I should be aware about in terms affecting data analysis of the MRI patient data for the hippocampus subfields tool?
If you could let me know, it would be appreciated.
Thanks,
Daniel
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