Thanks:)

Jacquie Marietta Research Assistant University of Iowa Hospitals and Clinics Department of Psychiatry W 292 GH Iowa City, Iowa 52245 319 353 8513 jacquie-marietta@uiowa.edu

-----Original Message----- From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of freesurfer-request@nmr.mgh.harvard.edu Sent: Wednesday, June 02, 2010 4:02 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Freesurfer Digest, Vol 76, Issue 4

Send Freesurfer mailing list submissions to freesurfer@nmr.mgh.harvard.edu

To subscribe or unsubscribe via the World Wide Web, visit https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer or, via email, send a message with subject or body 'help' to freesurfer-request@nmr.mgh.harvard.edu

You can reach the person managing the list at freesurfer-owner@nmr.mgh.harvard.edu

When replying, please edit your Subject line so it is more specific than "Re: Contents of Freesurfer digest..."

Today's Topics:

1. Re: autorecon2 error (Gabriel Go.Es.) 2. Re: autorecon2 error (Bruce Fischl) 3. Re: autorecon2 error (Gabriel Go.Es.) 4. Re: autorecon2 error (Bruce Fischl) 5. label2label with two subjects directories (Garth Coombs)

----------------------------------------------------------------------

Message: 1 Date: Wed, 2 Jun 2010 19:11:25 +0000 From: "Gabriel Go.Es." gabriellbk@hotmail.com Subject: Re: [Freesurfer] autorecon2 error To: nicks@nmr.mgh.harvard.edu, reuter@mit.edu Cc: free surfer freesurfer@nmr.mgh.harvard.edu Message-ID: SNT124-W28C9EC56CF343A93A46AFADCD00@phx.gbl Content-Type: text/plain; charset="iso-8859-1"

Thank you I redownloaded the mri_ca_label file and worked, it seems that gets corrupted when donwloading, but now it appears a new error, from the autorecon2, any idea???

#@# Intensity Normalization2 Wed Jun 2 14:58:57 CEST 2010

/root/trabajo/freesurfer/subjects/T1_GE1/mri

mri_normalize -aseg aseg.mgz -mask brainmask.mgz norm.mgz brain.mgz

using segmentation for initial intensity normalization

reading from norm.mgz...

mri_normalize: aseg volume aseg.mgz must be conformed

using MR volume brainmask.mgz to mask input volume...

unconformed source detected - conforming...

Linux localhost.localdomain 2.6.9-34.ELsmp #1 SMP Thu Mar 9 06:23:23 GMT 2006 x86_64 x86_64 x86_64 GNU/Linux

recon-all exited with ERRORS at Wed Jun 2 14:59:06 CEST 2010

Best, Gabriel _________________________________________________________________ ?Quieres conocer trucos de Windows 7? ?Los que ya lo usan te los cuentan! http://www.sietesunpueblodeexpertos.com/index_windows7.html