Hello Freesurfer experts,
I used recon-all command for all my subject by FS v.5.3. But now I decide to upgrade to FS v.6 to eliminate some segmentation errors. The pial errors still appear on the new output of FS v.6 Can I replace the braimask.mgz of FS v.6 by the brainmask.mgz of FS v.5.3 (that been already fixed) to fixed all the pial errors,
Have a nice day, Trinh
Hi Trinh
why not just rerun with 6.0? It should preserve all your manual edits, so it's just computer time cheers Bruce On Thu, 26 Nov 2015, Thục Trinh wrote:
Hello Freesurfer experts,
I used recon-all command for all my subject by FS v.5.3. But now I decide to upgrade to FS v.6 to eliminate some segmentation errors. The pial errors still appear on the new output of FS v.6 Can I replace the braimask.mgz of FS v.6 by the brainmask.mgz of FS v.5.3 (that been already fixed) to fixed all the pial errors,
Have a nice day, Trinh
freesurfer@nmr.mgh.harvard.edu
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Bruce Fischl -
Thục Trinh