Please sent the log file

On 12/15/2021 7:28 AM, xuan wrote:

External Email - Use Caution

Dear FreeSurfer Experts,

I am attempting to recon-all for my one subject for testing on my lab server. However, I get following error:

ncopen: filename "./tmp.mri_nu_correct.mni.13492/nu1.mnc": Not a netCDF file miopen: MINC package entry point Error opening ./tmp.mri_nu_correct.mni.13492/nu1.mnc mincRead(): error reading volume from file ./tmp.mri_nu_correct.mni.13492/nu1.mnc $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from ./tmp.mri_nu_correct.mni.13492/nu1.mnc...

And here is the relevant information: (1)FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c (2)Platform: Linux node-1-3 4.4.0-62-generic #83-Ubuntu SMP Wed Jan 18 14:10:15 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux (3)log file: please see attached file.

Thanks for the help!

Best, Xuan

---

Xuan Bu, Ph.D.

State Key Laboratory of Cognitive Neuroscience & Learning Beijing Normal University Email: pearl904311@foxmail.com Webpage: http://helab.bnu.edu.cn/xuanbu/

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer