Dear Dr. Fischl,

Thank you for the fast response.

We would like to obtain the entire distribution of the cortical thickness so we can calculate more statistical, such as the first and third quartile.

I tried read_cuv.m and it works perfect.

Thank you again.

Best regards, Chih-Yang Hsu

On Tue, Mar 7, 2017 at 8:45 AM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:

not sure exactly what you mean, but you can use read_curv.m to load the entire spatial map of thickness into matlab for each subject. If you tell us what you want to do we can give you more detailed advice

cheers Bruce On Tue, 7 Mar 2017, Chih-Yang Hsu wrote:

...

Hi, I am using Freesurfer to estimate cortical thickness.Is there any

way to

...

get all the details of the thickness distribution?

I used mri_segstats but it only provided mean and standard deviation. Thank you.

---

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Dear Dr. Greve,

Thank you for the response.

I will definitely try those.

Best regards, Chih-Yang Hsu

On Tue, Mar 7, 2017 at 9:34 AM, Douglas Greve greve@nmr.mgh.harvard.edu wrote:

There are no more moments you can get from it. You're best bet is to load the thickness (read_curv.m) and aparc (read_annotation) maps into matlab and then do what you want with them.

On 3/7/17 9:14 AM, Chih-Yang Hsu wrote:

Hi, I am using Freesurfer to estimate cortical thickness. Is there any way to get all the details of the thickness distribution?

I used mri_segstats but it only provided mean and standard deviation. Thank you.

---

Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

---

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The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.