yes, you can manually draw them in tksurfer, save them as a label file, then specify the label with -l <label file name> to mris_anatomical_stats.

cheers, Bruce On Wed, 19 Apr 2006, Goradia, Dhruman D wrote:

Hello All, Is it possible to find ROI based cortical surface measures using freesurfer? I am interested in manually tracing ROI and then obtaining thickness, surface area and curvature measures for the ROI. Is there a way to do this in freesurfer? Thank you -Dhruman

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