Hi Ruthger

that means that the subject was partially reprocessed but not completed. You can finish it with:

recon-all -s <subject> -sd <subjects dir> -make all

cheers Bruce

On Thu, 19 Apr 2012, Righart, Ruthger Dr. wrote:

Dear Freesurfers,

I analyzed a dataset with FS 5.1 but upon loading the data in tksurfer I get the following error:

mrisReadTriangleFile(/.../surf/lh.sphere.reg): surface doesn't match /.../surf/lh.inflated

The same error occurs when I run mris_preproc as a step before GLM analyses (mri_glmfit).

A similar problem was described in the mailing list and offered the possibility to resolve this with the following command: recon-all -s subjid -make all

This command only runs at the moment for a few of my subjects (I am at the moment waiting for the results of these analyses). For the majority of my subjects having the same error in mrisReadTriangleFile this command does not run. For those, it seems that the command -make all is not recognized.

Does anyone know why it does not run or is there an alternative solution in FS 5.1. for this problem?

Thank you very much in advance for your help!

Ruthger Righart _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer