Hello,
I am trying to superimpose an average curvature on the inflated brain surface of another subject. I know that you can use mris_average_curvature to create an average curvature of some specified brains, but I would like to use an average curvature that is not an average of the subjects' curvatures; instead, I'd like it to be an average of curvatures from a general atlas. How do I create, based on this average, the lh.avg_curv and rh.avg_curv files in a subject's surf/ directory?
Thanks, Sheeva Azma
Hi Sheeva,
you can use mrisp_paint:
mrisp_paint $FREESURFER_HOME/average/lh.average.tif#6 \ $SUBJECTS_DIR/$subject/surf/lh.sphere.reg \ $SUBJECTS_DIR/$subject/surf/lh.avg_sulc
mrisp_paint $FREESURFER_HOME/average/lh.average.tif#3 \ $SUBJECTS_DIR/$subject/surf/lh.sphere.reg \ $SUBJECTS_DIR/$subject/surf/lh.avg_curv
cheers, Bruce
On Thu, 15 Sep 2005, Sheeva Azma wrote:
Hello,
I am trying to superimpose an average curvature on the inflated brain surface of another subject. I know that you can use mris_average_curvature to create an average curvature of some specified brains, but I would like to use an average curvature that is not an average of the subjects' curvatures; instead, I'd like it to be an average of curvatures from a general atlas. How do I create, based on this average, the lh.avg_curv and rh.avg_curv files in a subject's surf/ directory?
Thanks, Sheeva Azma _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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