You can run recon-all with -nonormalization flag, which will skip that step.

Sita.

On Thu, 12 Nov 2009, africa millan wrote:

Hello,

Another question:If during the first recon-all, freesurfer makes skullstripping and normalization automatically... Is there any way to run the first recon-all without automatic normalization?

Is it possible?

Thanks

Af.

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