External Email - Use Caution
Dear Douglas N. Greve,
Thank you for quickly replying. Although I ask many questions, To reply to the mail kindly and quickly is very grateful for me. It became clear how to analyze it. Nevertheless, *there is an additional question*.
Q) 4. When I process T1WI data with Freesurfer dev version, is it installed based on the new version in HPC per version update for freesurfer? A) I don't know what you mean. hcp=?
*Additional question)* HPC is high-performance computing (computer cluster). I knew that in order to use the latest SynthSR and SynthSeg, I had to use the latest freesurfer developer version, and the developer version continues to be updated on a daily basis. When the freesurfer development version is updated, should I repeat the process of removing and re-installing the freesurfer development version to use the latest SynthSR and SynthSeg? And then, can you tell me what I need to do to measure the brain morphological property (e.g., cortical thickness and volume, etc) after using synthSR and synthSeg?
Thank you very much.
Best regards, Yoonho
On 1/4/2023 8:00 PM, Yoonho Hwang wrote:
External Email - Use Caution
Dear Douglas N. Greve,
Thank you for quickly replying. Although I ask many questions, To reply to the mail kindly and quickly is very grateful for me. It became clear how to analyze it. Nevertheless, *_there is an additional question_*.
Q) 4. When I process T1WI data with Freesurfer dev version, is it installed based on the new version in HPC per version update for freesurfer? A) I don't know what you mean. hcp=?
*_Additional question)_* HPC is high-performance computing (computer cluster). I knew that in order to use the latest SynthSR and SynthSeg, I had to use the latest freesurfer developer version, and the developer version continues to be updated on a daily basis. When the freesurfer development version is updated, should I repeat the process of removing and re-installing the freesurfer development version to use the latest SynthSR and SynthSeg?
@Rob D - can you answer?
And then, can you tell me what I need to do to measure the brain morphological property (e.g., cortical thickness and volume, etc) after using synthSR and synthSeg?
They are two separate processes. You have to run recon-all to get thickness, etc
Thank you very much.
Best regards, Yoonho
-- *Hwang, Yoonho* *Research professor* *Institute of Human Genomic Study,* *College of Medicine, Korea University*
*#123, Jeokgeum-ro, Danwon-gu, Ansan-si, Gyeonggi-do, **15355, Republic of Korea.*
*Email: ken.lmstar11@gmail.com*
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Douglas N. Greve -
Yoonho Hwang