To whomever this may concern:
I'd like to request an updated .pdf snapshot of the tutorial. Thank you.
Best, Adam
Adam,
A new snapshot of the tutorial has been posted to:
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/SnapShot
Nick
On Sat, 2006-01-14 at 16:30 -0500, Adam Cohen wrote:
To whomever this may concern:
I'd like to request an updated .pdf snapshot of the tutorial. Thank you.
Best, Adam _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi, I'm trying to create some custom labels using matlab, but haven't had much luck. From what I've read on the FAQ page, the last two columnns are optional, so I've left them out. My label file therefore has 4 columns - vertex ID, and x y z, with the total number of vertices at the top. When I try to load the label in tksurfer I get a message saying % tksurfer: could not parse 401th line in /data/flanders/work/alex/freesurfer/subjects_fe/1000001/matlab_results/1000001_rh.label
Where 401th line is the final line in the label file. I'm not sure if this is because I've ommitted the final two columns usually present in the standard label files, or if there's something else I'm missing. Thanks, Alex
Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne alexander.fornito@wh.org.au
Hi Alex,
send us the label and we'll have a look.
Bruce On Tue, 17 Jan 2006, Fornito, Alexander wrote:
Hi, I'm trying to create some custom labels using matlab, but haven't had much luck. From what I've read on the FAQ page, the last two columnns are optional, so I've left them out. My label file therefore has 4 columns - vertex ID, and x y z, with the total number of vertices at the top. When I try to load the label in tksurfer I get a message saying % tksurfer: could not parse 401th line in /data/flanders/work/alex/freesurfer/subjects_fe/1000001/matlab_results/1000001_rh.label
Where 401th line is the final line in the label file. I'm not sure if this is because I've ommitted the final two columns usually present in the standard label files, or if there's something else I'm missing. Thanks, Alex
Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne alexander.fornito@wh.org.au
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
It was a bug at our end. Sorry!!
Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne alexander.fornito@wh.org.au
________________________________
From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] Sent: Tue 17/01/2006 11:42 PM To: Fornito, Alexander Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Essential ingredients for labels
Hi Alex,
send us the label and we'll have a look.
Bruce On Tue, 17 Jan 2006, Fornito, Alexander wrote:
Hi, I'm trying to create some custom labels using matlab, but haven't had much luck. From what I've read on the FAQ page, the last two columnns are optional, so I've left them out. My label file therefore has 4 columns - vertex ID, and x y z, with the total number of vertices at the top. When I try to load the label in tksurfer I get a message saying % tksurfer: could not parse 401th line in /data/flanders/work/alex/freesurfer/subjects_fe/1000001/matlab_results/1000001_rh.label
Where 401th line is the final line in the label file. I'm not sure if this is because I've ommitted the final two columns usually present in the standard label files, or if there's something else I'm missing. Thanks, Alex
Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne alexander.fornito@wh.org.au
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
no problem
On Thu, 19 Jan 2006, Fornito, Alexander wrote:
It was a bug at our end. Sorry!!
Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne alexander.fornito@wh.org.au
From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] Sent: Tue 17/01/2006 11:42 PM To: Fornito, Alexander Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Essential ingredients for labels
Hi Alex,
send us the label and we'll have a look.
Bruce On Tue, 17 Jan 2006, Fornito, Alexander wrote:
Hi, I'm trying to create some custom labels using matlab, but haven't had much luck. From what I've read on the FAQ page, the last two columnns are optional, so I've left them out. My label file therefore has 4 columns - vertex ID, and x y z, with the total number of vertices at the top. When I try to load the label in tksurfer I get a message saying % tksurfer: could not parse 401th line in /data/flanders/work/alex/freesurfer/subjects_fe/1000001/matlab_results/1000001_rh.label
Where 401th line is the final line in the label file. I'm not sure if this is because I've ommitted the final two columns usually present in the standard label files, or if there's something else I'm missing. Thanks, Alex
Alex Fornito M.Psych/PhD (clin. neuro.) candidate Melbourne Neuropsychiatry Centre and Department of Psychology The University of Melbourne alexander.fornito@wh.org.au
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
-
Adam Cohen -
Bruce Fischl -
Fornito, Alexander -
Nick Schmansky