interhemispheric registration in native space

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Milde, Christopher

14 Dec 2015 14 Dec '15

2:42 a.m.

Dear Freesurfer experts,

is there a way to perform an interhemispheric registration with rh, lh surfaces in native space?

Preferentially, I would perform the registration with smoothwm surfaces.

I only found the xhemi command which refers to fsaverage as a target

Best wishes,

Christopher

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Bruce Fischl

14 Dec 14 Dec

8:24 a.m.

Hi Christopher

mris_left_righ_register will do the trick, although Doug might have something else. Give it the left and right sphere files as input and specify the registered left and right spheres as output

cheers Bruce

On Mon, 14 Dec 2015, Milde, Christopher wrote:

...

Dear Freesurfer experts,

is there a way to perform an interhemispheric registration with rh, lh surfa ces in native space?

Preferentially, I would perform the registration with smoothwm surfaces.

I only found the xhemi command which refers to fsaverage as a target

Best wishes,

Christopher

Douglas N Greve

12:04 p.m.

you can use mris_apply_reg to apply the resulting registration (may need to get you a copy)

On 12/14/2015 08:24 AM, Bruce Fischl wrote:

...

Hi Christopher

mris_left_righ_register will do the trick, although Doug might have something else. Give it the left and right sphere files as input and specify the registered left and right spheres as output

cheers Bruce

On Mon, 14 Dec 2015, Milde, Christopher wrote:

...
Dear Freesurfer experts,

is there a way to perform an interhemispheric registration with rh, lh surfa ces in native space? Preferentially, I would perform the registration with smoothwm surfaces.

I only found the xhemi command which refers to fsaverage as a target

Best wishes,

Christopher

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

Douglas N Greve

12:02 p.m.

Try mris_left_right_register

On 12/14/2015 02:42 AM, Milde, Christopher wrote:

...

Dear Freesurfer experts, is there a way to perform an interhemispheric registration with rh, lh surfaces in native space? Preferentially, I would perform the registration with smoothwm surfaces. I only found the xhemi command which refers to fsaverage as a target Best wishes, Christopher

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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Bruce Fischl
Douglas N Greve
Milde, Christopher